RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ABHD13Q7L211 337 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 BVESQ8NE79 360 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 TCF7L1Q9HCS4 588 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 MKKSQ9NPJ1 570 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 TAS2R8Q9NYW2 309 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 PYCARD-AS1I3L0S3 204 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 NARSO43776 548 aaKnown RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 DNAJB6O75190 326 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 VSIG10L2P0DP72 767 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 AK4P27144 223 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 GPR143P51810 404 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 UBXN2BQ14CS0 331 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 CSRP2Q16527 193 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 Q499Y3 187 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 FAAP20Q6NZ36 180 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ALKAL2Q6UX46 152 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ZAR1Q86SH2 424 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 GLB1L2Q8IW92 636 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 HMGB4Q8WW32 186 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ZNRF4Q8WWF5 429 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 RNF166Q96A37 237 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 SCARF2Q96GP6 870 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 RSPH9Q9H1X1 276 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 SPACA6W5XKT8 324 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 H7C417 338 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 ARPC5O15511 151 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 TNFSF14O43557 240 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 FGF17O60258 216 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 LDB3O75112 727 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 GLCEO94923 617 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 POU2F2P09086 479 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 TACSTD2P09758 323 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 CSF2RAP15509 400 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 GSG1LQ6UXU4 331 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF550Q7Z398 422 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 PDZD9Q8IXQ8 264 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 CAMKVQ8NCB2 501 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 DOK4Q8TEW6 326 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-202ENST00000413219 ARSGQ96EG1 525 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 ARL6Q9H0F7 186 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 MTFP1Q9UDX5 166 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 PDE4DIPQ5VU43 2346 aa16.13■□□□□ 0.17
SDCBP-202ENST00000413219 F5H5P2 479 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ADAM11O75078 769 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 RBBP9O75884 186 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ADH1BP00325 375 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 EGFP01133 1207 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 RPL4P36578 427 aaKnown RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 EMDP50402 254 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 GMFBP60983 142 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 RPS15P62841 145 aaKnown RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 MAT1AQ00266 395 aaKnown RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 SGCGQ13326 291 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 EXOSC7Q15024 291 aaKnown RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 PDGFRLQ15198 375 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR52H1Q8NGJ2 320 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR5M9Q8NGP3 310 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 SMARCD2Q92925 531 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 CTHRC1Q96CG8 243 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 WDR89Q96FK6 387 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR1F2PQ96R84 312 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 NMNAT3Q96T66 252 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 PELOQ9BRX2 385 aaKnown RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ZDHHC4Q9NPG8 344 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ADAM18Q9Y3Q7 739 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 TRBV5-5A0A0J9YX44 114 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR6C68A6NDL8 312 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 ANXA2P2A6NMY6 339 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 XRCC3O43542 346 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 CSF1P09603 554 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 C5AR1P21730 350 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 KIR2DS3Q14952 304 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 LRRTM1Q86UE6 522 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 CDH26Q8IXH8 852 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR2AK2Q8NG84 335 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 OR6K6Q8NGW6 343 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 FLVCR1-AS1Q8TAF5 88 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 GINS4Q9BRT9 223 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 TMEM74BQ9NUR3 256 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 SERGEFQ9UGK8 458 aa16.12■□□□□ 0.17
SDCBP-202ENST00000413219 IDSB3KWA1 339 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 PTHLHP12272 177 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 ADRA2CP18825 462 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 TPMTP51580 245 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 H2BFSP57053 126 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 RPS21P63220 83 aaKnown RBP16.11■□□□□ 0.17
SDCBP-202ENST00000413219 LINC01590Q5TEZ4 76 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 FAM220AQ7Z4H9 259 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 CACUL1Q86Y37 369 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 ZNF614Q8N883 585 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 OR52B4Q8NGK2 314 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 OR5M1Q8NGP8 315 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 OR6N1Q8NGY5 312 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 OR1S1Q8NH92 325 aa16.11■□□□□ 0.17
SDCBP-202ENST00000413219 GPX7Q96SL4 187 aaPredicted RBP16.11■□□□□ 0.17
SDCBP-202ENST00000413219 TWSG1Q9GZX9 223 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms