RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 KITP10721 976 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 DAOP14920 347 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 ZNF43P17038 809 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 THBS4P35443 961 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 RPS5P46782 204 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 CAPZA2P47755 286 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 DSTNP60981 165 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 HOXC5Q00444 222 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 IL1RL1Q01638 556 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 HGFACQ04756 655 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 C1DQ13901 141 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 EFNB3Q15768 340 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 ZSWIM7Q19AV6 140 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 HHATQ5VTY9 493 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 GLB1L3Q8NCI6 653 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 MFSD8Q8NHS3 518 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 ZNF317Q96PQ6 595 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 SOX7Q9BT81 388 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 LINC00470Q9BZP3 86 aa12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 CRNNQ9UBG3 495 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-202ENST00000412256 A0A096LPI6 279 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 A0A0G2JPF8 293 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 TMEM229AB2RXF0 380 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 HNRNPCL2B2RXH8 293 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 HNRNPCL3B7ZW38 293 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NPIPB7O75200 414 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 PDE5AO76074 875 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IGLV1-44P01699 117 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 HNRNPCL4P0DMR1 293 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 PNMTP11086 282 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 CBR1P16152 277 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NPR2P20594 1047 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 PPOXP50336 477 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 MVDP53602 400 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NPRL3Q12980 569 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 C3orf36Q3SXR2 165 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 GPR137CQ8N3F9 429 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 FAM169BQ8N8A8 192 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ANKRD42Q8N9B4 389 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NEU4Q8WWR8 484 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 TMEM19Q96HH6 336 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ANKRD27Q96NW4 1050 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 DOK1Q99704 481 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SPATA9Q9BWV2 254 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 TPT1P8Q9HAU6 139 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 MOV10Q9HCE1 1003 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 DYNLRB1Q9NP97 96 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 FBXO9Q9UK97 447 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IFT52Q9Y366 437 aa12.08□□□□□ -0.48
RAB11FIP3-202ENST00000412256 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 HDAC3O15379 428 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SLC43A1O75387 559 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SRP14P37108 136 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 CHN2P52757 468 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ADRM1Q16186 407 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 GTDC1Q4AE62 458 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 C6orf10Q5SRN2 563 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ITCHQ96J02 903 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 OXGR1Q96P68 337 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SNX18Q96RF0 628 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NELFAQ9H3P2 528 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 RMND5AQ9H871 391 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 CRLF2Q9HC73 371 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 GPR35Q9HC97 309 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 SEC14L4Q9UDX3 406 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 CHST2Q9Y4C5 530 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 V9GYY5 206 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 DSPPQ9NZW4 1301 aa12.07□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IGHV2OR16-5A0A0B4J2B6 119 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 FTCDNL1E5RQL4 147 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IGKV3-15P01624 115 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ADRA2AP08913 450 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ZCCHC18P0CG32 403 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IDO1P14902 403 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IFNGR1P15260 489 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 CBLP22681 906 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 GIFP27352 417 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 IL2RGP31785 369 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 ARR3P36575 388 aa12.06□□□□□ -0.48
RAB11FIP3-202ENST00000412256 DAG1Q14118 895 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms