RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 ZNF879B4DU55 563 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 NEDD8-MDP1E9PL57 170 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 I3L521 148 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 KPNA3O00505 521 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GPR171O14626 319 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PDCD5O14737 125 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 EMC8O43402 210 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 AKR7A2O43488 359 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GPRIN2O60269 458 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MOSPD3O75425 235 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 B3GALNT1O75752 331 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TSPAN9O75954 239 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 AK1P00568 194 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 EGFP01133 1207 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 IFNGP01579 166 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CXCL10P02778 98 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 IL5P05113 134 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GRPP07492 148 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GUSBP08236 651 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GIPP09681 153 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RAB40ALP0C0E4 278 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 ACP5P13686 325 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CSNK2A2P19784 350 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 DNASE1P24855 282 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TEAD1P28347 426 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PPIFP30405 207 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CALCRP30988 508 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GKP32189 559 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MPIP34949 423 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 FAUP35544 74 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PPM1AP35813 382 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 AHRP35869 848 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TRIM23P36406 574 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TGM4P49221 684 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CCR9P51686 369 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CLCNKAP51800 687 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 AGFG1P52594 562 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CTBP2P56545 445 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RGS8P57771 180 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SNRPD2P62316 118 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MC1RQ01726 317 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SSBP1Q04837 148 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PUDPQ08623 228 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 HSPB3Q12988 150 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CAMK2DQ13557 499 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 EXOSC2Q13868 293 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CEBPEQ15744 281 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 AANATQ16613 207 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 ZSWIM7Q19AV6 140 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GSG1Q2KHT4 349 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 LRRK1Q38SD2 2015 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SLC36A2Q495M3 483 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CCSMST1Q4G0I0 132 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OLFML2AQ68BL7 652 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TXNDC8Q6A555 127 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR4C11Q6IEV9 310 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 NIPAL3Q6P499 406 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TMEM220Q6QAJ8 160 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 FAM198BQ6UWH4 519 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 WASH2PQ6VEQ5 465 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TMEM91Q6ZNR0 172 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RTL4Q6ZR62 310 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PLEKHM3Q6ZWE6 761 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MEPCEQ7L2J0 689 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PARS2Q7L3T8 475 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 KRT74Q7RTS7 529 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 C16orf62Q7Z3J2 963 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 KCTD20Q7Z5Y7 419 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TMCO2Q7Z6W1 182 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RANBP3LQ86VV4 465 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TMEM173Q86WV6 379 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TRAPPC5Q8IUR0 188 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GRAMD2AQ8IUY3 354 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SLC38A6Q8IZM9 456 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SLC39A11Q8N1S5 342 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 EIF4E3Q8N5X7 224 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 ESX1Q8N693 406 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 CELF5Q8N6W0 485 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SAMD12Q8N8I0 201 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 PNLDC1Q8NA58 520 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR4M2Q8NGB6 313 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR8D4Q8NGM9 314 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR6T1Q8NGN1 323 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR2T4Q8NH00 348 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR5W2Q8NH69 310 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 OR5K2Q8NHB8 316 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 TRMT10AQ8TBZ6 339 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 FANK1Q8TC84 345 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 GANCQ8TET4 914 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 SPRYD4Q8WW59 207 aaPredicted RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 XAGE5Q8WWM1 108 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RAB40AQ8WXH6 277 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 RBPMSQ93062 196 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 YIPF5Q969M3 257 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 EXOSC8Q96B26 276 aaKnown RBP3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 R3HDM4Q96D70 268 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 NUS1Q96E22 293 aa3.23□□□□□ -1.89
RNU6-55P-201ENST00000411092 MVB12AQ96EY5 273 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms