RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MUC3AQ02505 3323 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 VSTM2BA6NLU5 285 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 HPGDSO60760 199 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 APOA1P02647 267 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 HIST1H2ABP04908 130 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 ZXDAP98168 799 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 EMC4Q5J8M3 183 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 C1QL3Q5VWW1 255 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 PEAR1Q5VY43 1037 aaPredicted RBP18.27■□□□□ 0.51
USP39-204ENST00000409766 HIST3H2AQ7L7L0 130 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 CEACAM19Q7Z692 300 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 MAML2Q8IZL2 1156 aaPredicted RBP18.27■□□□□ 0.51
USP39-204ENST00000409766 MS4A15Q8N5U1 240 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 GPR119Q8TDV5 335 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 SNX33Q8WV41 574 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 HIST1H2ACQ93077 130 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 SOSTQ9BQB4 213 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 NCDNQ9UBB6 729 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 GRHPRQ9UBQ7 328 aa18.27■□□□□ 0.51
USP39-204ENST00000409766 TRAV36DV7A0A075B6V5 113 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 ZNF354AO60765 605 aaPredicted RBP18.26■□□□□ 0.51
USP39-204ENST00000409766 GBX2P52951 348 aaPredicted RBP18.26■□□□□ 0.51
USP39-204ENST00000409766 SIRPAP78324 504 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 QPRTQ15274 297 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 DUSP19Q8WTR2 217 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 SMIM19Q96E16 107 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 TSSK2Q96PF2 358 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 TSPAN32Q96QS1 320 aa18.26■□□□□ 0.51
USP39-204ENST00000409766 CCDC86Q9H6F5 360 aaKnown RBP18.26■□□□□ 0.51
USP39-204ENST00000409766 LAMTOR5O43504 91 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 SSX4O60224 188 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 TMCC2O75069 709 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 POLR2HP52434 150 aaKnown RBP18.25■□□□□ 0.51
USP39-204ENST00000409766 CD300CQ08708 224 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 CDK5R1Q15078 307 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 ACSM3Q53FZ2 586 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 MESTQ5EB52 335 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 MZT2AQ6P582 158 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 NUBPLQ8TB37 319 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 METTL21AQ8WXB1 218 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 WDR77Q9BQA1 342 aaPredicted RBP18.25■□□□□ 0.51
USP39-204ENST00000409766 PTDSS2Q9BVG9 487 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 APMAPQ9HDC9 416 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 MOKQ9UQ07 419 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 A0A1W2PQ09 198 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 FAM171A2A8MVW0 826 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 NPIPB7O75200 414 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 CSF3P09919 207 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 EVX1P49640 407 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 EMP2P54851 167 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 SLC26A5P58743 744 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 HSF2Q03933 536 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 EFR3AQ14156 821 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 CNIH2Q6PI25 160 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 TPRA1Q86W33 373 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 PPP1R3BQ86XI6 285 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 TEX19Q8NA77 164 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 IFI44Q8TCB0 444 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 ACOT12Q8WYK0 555 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 NDEL1Q9GZM8 345 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 WDR70Q9NW82 654 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 TAS2R5Q9NYW4 299 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 GNG8Q9UK08 70 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 PCDHGB2Q9Y5G2 931 aa18.25■□□□□ 0.51
USP39-204ENST00000409766 DMDP11532 3685 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 TMED7-TICAM2A0A0A6YYA0 188 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 A0A1W2PRG6 482 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 SEC14L5O43304 696 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 CPNE3O75131 537 aaKnown RBP18.24■□□□□ 0.51
USP39-204ENST00000409766 SLC25A12O75746 678 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 HBMQ6B0K9 141 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 GPR139Q6DWJ6 353 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 RPL22L1Q6P5R6 122 aaKnown RBP18.24■□□□□ 0.51
USP39-204ENST00000409766 PAPD4Q6PIY7 484 aaKnown RBP18.24■□□□□ 0.51
USP39-204ENST00000409766 ADGRG3Q86Y34 549 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 ZNF511Q8NB15 262 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 OR13C5Q8NGS8 318 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 THAP3Q8WTV1 239 aaPredicted RBP18.24■□□□□ 0.51
USP39-204ENST00000409766 PPP1R3EQ9H7J1 279 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 ACOXLQ9NUZ1 547 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 OCIAD1Q9NX40 245 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 ZNF346Q9UL40 294 aaKnown RBP18.24■□□□□ 0.51
USP39-204ENST00000409766 TMED7Q9Y3B3 224 aa18.24■□□□□ 0.51
USP39-204ENST00000409766 TMEM200CA6NKL6 621 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 DCTN6O00399 190 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 SUSD5O60279 629 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 MT-ATP6P00846 226 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 CD1AP06126 327 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 MYL9P24844 172 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 GDI2P50395 445 aaKnown RBP18.23■□□□□ 0.51
USP39-204ENST00000409766 FBXW4P57775 412 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 SCN1BQ07699 218 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 CCDC58Q4VC31 144 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 LCN10Q6JVE6 187 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 METAP1DQ6UB28 335 aaPredicted RBP18.23■□□□□ 0.51
USP39-204ENST00000409766 GRINAQ7Z429 371 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 MISPQ8IVT2 679 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 THAP4Q8WY91 577 aa18.23■□□□□ 0.51
USP39-204ENST00000409766 MRPL48Q96GC5 212 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms