RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CRYAAP02489 173 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 IDH3AP50213 366 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
CBX3-203ENST00000409747 HOXC5Q00444 222 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 EGR4Q05215 589 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 LOXL1Q08397 574 aaPredicted RBP12.87□□□□□ -0.35
CBX3-203ENST00000409747 FAM69AQ5T7M9 428 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 FAM91A1Q658Y4 838 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 NET1Q7Z628 596 aaPredicted RBP12.87□□□□□ -0.35
CBX3-203ENST00000409747 LSRQ86X29 649 aaPredicted RBP12.87□□□□□ -0.35
CBX3-203ENST00000409747 ZNF525Q8N782 197 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 OXGR1Q96P68 337 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 ZNF607Q96SK3 696 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 EVA1AQ9H8M9 152 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 TESQ9UGI8 421 aaKnown RBP12.87□□□□□ -0.35
CBX3-203ENST00000409747 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
CBX3-203ENST00000409747 IGHV1-18A0A0C4DH31 117 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 EVPLLA8MZ36 301 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 SLC43A1O75387 559 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 IFNA2P01563 188 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 CLDN17P56750 224 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 CDK6Q00534 326 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 ROR2Q01974 943 aaKnown RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 C1DQ13901 141 aaKnown RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 ALG10BQ5I7T1 473 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 HIPK1Q86Z02 1210 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 FUNDC1Q8IVP5 155 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 DYDC1Q8WWB3 177 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 PROX1Q92786 737 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 BCL2L2Q92843 193 aaPredicted RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 TMEM38AQ9H6F2 299 aa12.86□□□□□ -0.35
CBX3-203ENST00000409747 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 FBXO9Q9UK97 447 aaPredicted RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 ANK3Q12955 4377 aaKnown RBP12.86□□□□□ -0.35
CBX3-203ENST00000409747 ABCA1O95477 2261 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 TRAV36DV7A0A075B6V5 113 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 A0A096LNT2 108 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 A0A1B0GWA3 101 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 RPL36A-HNRNPH2H7BZ11 118 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 UPK3AO75631 287 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SERPINB7O75635 380 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 PDE5AO76074 875 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SLC6A2P23975 617 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ATP4BP51164 291 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 LGALS3BPQ08380 585 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SCARB2Q14108 478 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 TMEM249Q2WGJ8 235 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 MSRB3Q8IXL7 192 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ADPRHL1Q8NDY3 354 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 HTRA1Q92743 480 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 EPYCQ99645 322 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 MDFIQ99750 246 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 EBF4Q9BQW3 602 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SLCO1B3Q9NPD5 702 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 M0R082 166 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ZNF432O94892 652 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 SERPINF1P36955 418 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 AQP5P55064 265 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 RGS8P57771 180 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 VLDLRP98155 873 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SQLEQ14534 574 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SWI5Q1ZZU3 235 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 CHRFAM7AQ494W8 412 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 C6orf52Q5T4I8 152 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 PODNL1Q6PEZ8 512 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 H1FNTQ75WM6 255 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 CXXC5Q7LFL8 322 aaKnown RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 KDM8Q8N371 416 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 OR4F15Q8NGB8 312 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ZNF417Q8TAU3 575 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 SLC47A1Q96FL8 570 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ATP6V1G3Q96LB4 118 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
CBX3-203ENST00000409747 CA10Q9NS85 328 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 VAPAQ9P0L0 249 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 CORINQ9Y5Q5 1042 aa12.85□□□□□ -0.35
CBX3-203ENST00000409747 A0A096LPE4 126 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms