RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ACVR2AP27037 513 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 ADH6P28332 368 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 RPS7P62081 194 aaKnown RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 MFAP5Q13361 173 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 SLC25A30Q5SVS4 291 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF362Q5T0B9 420 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 AADACL4Q5VUY2 407 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 FOXB2Q5VYV0 432 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 GTF2IRD2BQ6EKJ0 949 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 GALNTL5Q7Z4T8 443 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 GTF2IRD2Q86UP8 949 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 SLC43A2Q8N370 569 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 SLC37A3Q8NCC5 494 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF248Q8NDW4 579 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 NMNAT3Q96T66 252 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 ZFP64Q9NPA5 681 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 GRHPRQ9UBQ7 328 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 BOKQ9UMX3 212 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 CSAG2Q9Y5P2 127 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 MED12Q93074 2177 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 CCDC160A6NGH7 325 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 LIPT2A6NK58 231 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 SNTNA6NMZ2 147 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 FAM166BA8MTA8 275 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 H7C1C5 153 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 PLPP3O14495 311 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 INMTO95050 263 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 SP1P08047 785 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 PCMT1P22061 227 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 SRD5A2P31213 254 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 SLC15A1P46059 708 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 MTNR1AP48039 350 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 ALDH3B2P48448 385 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 OR2B6P58173 313 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 LCN6P62502 163 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 FOXO1Q12778 655 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 RAB39AQ14964 217 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 SGCBQ16585 318 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 NXNL2Q5VZ03 156 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 GPR141Q7Z602 305 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 FAM83FQ8NEG4 500 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-204ENST00000409727 OR51L1Q8NGJ5 315 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 MFSD8Q8NHS3 518 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 PTP4A1Q93096 173 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 RFKQ969G6 155 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 C5orf34Q96MH7 638 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.62
CHMP3-204ENST00000409727 PIGQQ9BRB3 760 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 NDEL1Q9GZM8 345 aa11.21□□□□□ -0.62
CHMP3-204ENST00000409727 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.62
CHMP3-204ENST00000409727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.21□□□□□ -0.62
CHMP3-204ENST00000409727 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 PAICSP22234 425 aaKnown RBP11.2□□□□□ -0.62
CHMP3-204ENST00000409727 ATP6V1E1P36543 226 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 MAP2K6P52564 334 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 SOX8P57073 446 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 TLE3Q04726 772 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 NIPAL3Q6P499 406 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 LEG1Q6P5S2 330 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 FAM122BQ7Z309 247 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 MDS2Q8NDY4 140 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 LGALS12Q96DT0 336 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 INIPQ9NRY2 104 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 MRPL39Q9NYK5 338 aaKnown RBP11.2□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF346Q9UL40 294 aaKnown RBP11.2□□□□□ -0.62
CHMP3-204ENST00000409727 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
CHMP3-204ENST00000409727 H0YC42 278 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ARPC3O15145 178 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 NME2P1O60361 137 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 LCKP06239 509 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CELA3AP09093 270 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CD46P15529 392 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 NME2P22392 152 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 HTR1FP30939 366 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SDHAP31040 664 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CDKN2AP42771 156 aaKnown RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 DIO1P49895 249 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MEOX1P50221 254 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 PUDPQ08623 228 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MELKQ14680 651 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM44Q2T9K0 475 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 H1FNTQ75WM6 255 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 GID4Q8IVV7 300 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 UBQLNLQ8IYU4 475 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SVOPQ8N4V2 548 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM99Q8N816 258 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms