RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 SMCHD1A6NHR9 2005 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 DNAJB13P59910 316 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 UBE2G2P60604 165 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 RGNQ15493 299 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 MOB3BQ86TA1 216 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 MINDY1Q8N5J2 469 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 OSGIN2Q9Y236 505 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 POLR2AP24928 1970 aaKnown RBP7.81□□□□□ -1.16
SCN9A-203ENST00000409672 GUSBP08236 651 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 CBR1P16152 277 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 PROZP22891 400 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 PGAP1Q75T13 922 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 OR1J2Q8NGS2 313 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 ADAMTS16Q8TE57 1224 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 PDXPQ96GD0 296 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 ENTPD2Q9Y5L3 495 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 SVILO95425 2214 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 FAM208AQ9UK61 1670 aaKnown RBP7.81□□□□□ -1.16
SCN9A-203ENST00000409672 HTR3AP46098 478 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 WNT7BP56706 349 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 CREB3L2Q70SY1 520 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 GCNT2Q8N0V5 402 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 ACOT11Q8WXI4 607 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-203ENST00000409672 SLC2A13Q96QE2 648 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 MENTQ9BUN1 341 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 KATNB1Q9BVA0 655 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 XYLT2Q9H1B5 865 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 GAL3ST2Q9H3Q3 398 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 LOXL2Q9Y4K0 774 aa7.81□□□□□ -1.16
SCN9A-203ENST00000409672 RGPD1P0DJD0 1748 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 C2CD4DB7Z1M9 353 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 AIFM1O95831 613 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 FGF3P11487 239 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ZFP82Q8N141 532 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 FNDC9Q8TBE3 224 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 MMP28Q9H239 520 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 POM121CA8CG34 1229 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CNMDO75829 334 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 APOA2P02652 100 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 RNF224P0DH78 156 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A6P0DMU7 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A5P0DMU8 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A7P0DMV0 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A8P0DMV1 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A9P0DMV2 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SPINK2P20155 84 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 RAB11AP62491 216 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A2Q5DJT8 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A1Q5HYN5 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CORO6Q6QEF8 472 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CT45A3Q8NHU0 189 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF75AQ96N20 296 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 NICN1Q9BSH3 213 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 PTPRZ1P23471 2315 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 C17orf113A0A1B0GUU1 675 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ACOD1A6NK06 481 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 J3KRW8 73 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 EVI2BP34910 448 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SYPL1Q16563 259 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 GPR148Q8TDV2 347 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SLC22A12Q96S37 553 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SEMA6CQ9H3T2 930 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 WASH6PQ9NQA3 447 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 HAX1O00165 279 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 AIPO00170 330 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SIRPB1O00241 398 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 EPOP01588 193 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 IL3RAP26951 378 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 HOXD9P28356 352 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 HMGCLP35914 325 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CDC34P49427 236 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 IQCKQ8N0W5 287 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CSO75390 466 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 FOSL1P15407 271 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ETV4P43268 484 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 MAP2K3P46734 347 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 UBE2IP63279 158 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF322Q6U7Q0 402 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 RHEBL1Q8TAI7 183 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 PELI2Q9HAT8 420 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SCN1AP35498 2009 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 TRPM6Q9BX84 2022 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 SEC14L6B5MCN3 397 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 OXSR1O95747 527 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 OR8G3PP0DMU2 310 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 RPL35P42766 123 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 GNG10P50151 68 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 HACD4Q5VWC8 232 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 RPL7L1Q6DKI1 246 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF318Q5VUA4 2279 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 JRKO75564 520 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 NSA2O95478 260 aaKnown RBP7.8□□□□□ -1.16
SCN9A-203ENST00000409672 FABP6P51161 128 aa7.8□□□□□ -1.16
SCN9A-203ENST00000409672 CCL7P80098 99 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms