RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NMNAT1Q9HAN9 279 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 BCL2L10Q9HD36 194 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 IMPAD1Q9NX62 359 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 FBXL2Q9UKC9 423 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 TMCC3Q9ULS5 477 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 MGAT4BQ9UQ53 548 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 GPC6Q9Y625 555 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 USF3Q68DE3 2245 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 DSPPQ9NZW4 1301 aa11.39□□□□□ -0.59
CHRNA1-205ENST00000409542 M0R3G1 203 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 MSTNO14793 375 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 FFAR1O14842 300 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 HCRTR2O43614 444 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 SERPINB7O75635 380 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CBR3O75828 277 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 NT5EP21589 574 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 SERPINB10P48595 397 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 XKP51811 444 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CRISP1P54107 249 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 DUSP2Q05923 314 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 GNA13Q14344 377 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 IRF3Q14653 427 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 ZNF846Q147U1 533 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 EXOSC7Q15024 291 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 DGUOKQ16854 277 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 PRAMEF8Q5VWM4 474 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 PRAMEF7Q5VXH5 474 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 TMEM81Q6P7N7 255 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 BHLHB9Q6PI77 547 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 KLHL17Q6TDP4 642 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 KRT73Q86Y46 540 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 GRAMD2AQ8IUY3 354 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 AQP11Q8NBQ7 271 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 MAPK1IP1LQ8NDC0 245 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 C17orf47Q8NEP4 570 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 DYNC2LI1Q8TCX1 351 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 ZC3HAV1LQ96H79 300 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 COL21A1Q96P44 957 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 GSX2Q9BZM3 304 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 WDR12Q9GZL7 423 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CNOT2Q9NZN8 540 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 EFCAB10A6NFE3 127 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 NME6O75414 186 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 SLITRK5O94991 958 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 LCKP06239 509 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 H1F0P07305 194 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CD36P16671 472 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 ZNF708P17019 499 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 GPC1P35052 558 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 UGT2B10P36537 528 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CD79BP40259 229 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 KIR2DL2P43627 348 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 IDH2P48735 452 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 NCBP2P52298 156 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 GANABQ14697 944 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 OR5M10Q6IEU7 315 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 FAM180BQ6P0A1 224 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CNEP1R1Q8N9A8 125 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 DRAXINQ8NBI3 349 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 OR4K14Q8NGD5 310 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 OR56A1Q8NGH5 318 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 RAB8BQ92930 207 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 SH3YL1Q96HL8 342 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 BBS4Q96RK4 519 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 FUZQ9BT04 418 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 MED18Q9BUE0 208 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 SPATA5L1Q9BVQ7 753 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 OR51I1Q9H343 314 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 HMG20AQ9NP66 347 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 AKIP1Q9NQ31 210 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 FAIMQ9NVQ4 179 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 TAS2R10Q9NYW0 307 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 KLRF1Q9NZS2 232 aa11.38□□□□□ -0.59
CHRNA1-205ENST00000409542 CLDN25C9JDP6 229 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 H0YC42 278 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 ZIC3O60481 467 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PLAUP00749 431 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CGAP01215 116 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 GASTP01350 101 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 OR12D1P0DN82 309 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PIPP12273 146 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 OSMP13725 252 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CPMP14384 443 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 NAGAP17050 411 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 NR4A1P22736 598 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CHMP24386 653 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 OPRL1P41146 370 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 GSSP48637 474 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CLDN15P56746 228 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 SIRPAP78324 504 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 TMED1Q13445 227 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 DGCR6Q14129 220 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PTGES3Q15185 160 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PRICKLE4Q2TBC4 344 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 ANKDD1AQ495B1 522 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 SLX4IPQ5VYV7 408 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms