RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 MYNNQ9NPC7 610 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 A0A1W2PQF6 199 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 TSPAN11A1L157 253 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SEC14L5O43304 696 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SSX5O60225 188 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 NDUFS6O75380 124 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SPP1P10451 314 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 PPP3CBP16298 524 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 C5AR1P21730 350 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SRSF5Q13243 272 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SMCO1Q147U7 214 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 C1orf94Q6P1W5 598 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 LINC00469Q8N7U9 141 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR4D10Q8NGI6 311 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR10R2Q8NGX6 335 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR56A3Q8NH54 315 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 MRPS24Q96EL2 167 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 REG4Q9BYZ8 158 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 CHST6Q9GZX3 395 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 CHRDQ9H2X0 955 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 TCF7L1Q9HCS4 588 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 NEUROD4Q9HD90 331 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 C20orf141Q9NUB4 165 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 KIF25Q9UIL4 384 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 ATG4BQ9Y4P1 393 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 HEATR5BQ9P2D3 2071 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 NDUFS4O43181 175 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 PTP4A3O75365 173 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 PRPH2P23942 346 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 NFYBP25208 207 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 ZNF627Q7L945 461 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR1E3Q8WZA6 343 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 TM4SF18Q96CE8 201 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 PEX11GQ96HA9 241 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 SOSTQ9BQB4 213 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 APOOQ9BUR5 198 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 C6orf106Q9H6K1 298 aaPredicted RBP11.92□□□□□ -0.5
PTPRN-202ENST00000409251 UNC13CQ8NB66 2214 aa11.92□□□□□ -0.5
PTPRN-202ENST00000409251 OR14I1A6ND48 311 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 M0QYG6 137 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 AKR7A3O95154 331 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 EPXP11678 715 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 UGT2B7P16662 529 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 HSD3B2P26439 372 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 H2BFSP57053 126 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 RAP2BP61225 183 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 RPS15P62841 145 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 RPS21P63220 83 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 NNATQ16517 81 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 DEFB110Q30KQ9 67 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 DCUN1D3Q8IWE4 304 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 OR52E1Q8NGJ3 308 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 LCN9Q8WX39 176 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 HRH4Q9H3N8 390 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 A0A1B0GTH9 108 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 IMPA2O14732 288 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ATP1B1P05026 303 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 CEACAM5P06731 702 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ITPKBP27987 946 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 HTR1FP30939 366 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 CEBPGP53567 150 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 SNRPNP63162 240 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 OR7E24Q6IFN5 339 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 MORN4Q8NDC4 146 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 PELOQ9BRX2 385 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 GBF1Q92538 1859 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 HMGN1P05114 100 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ANXA2P07355 339 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 GABRA1P14867 456 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 AP3S2P59780 193 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 TGIF1Q15583 401 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 KRBOX4Q5JUW0 171 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 KHDRBS2Q5VWX1 349 aaKnown RBP11.91□□□□□ -0.5
PTPRN-202ENST00000409251 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 TSSK4Q6SA08 328 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 ELP4Q96EB1 424 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 SPSB2Q99619 263 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 C20orf24Q9BUV8 137 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 SARGQ9BW04 601 aa11.91□□□□□ -0.5
PTPRN-202ENST00000409251 MEPEQ9NQ76 525 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms