RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 RAB3BP20337 219 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 PSMB10P40306 273 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 MAP2K4P45985 399 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SEC61A1P61619 476 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF628Q5EBL2 1059 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 HES5Q5TA89 166 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 OTUD1Q5VV17 481 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF773Q6PK81 442 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 MBOAT2Q6ZWT7 520 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 NLRC3Q7RTR2 1065 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 FAM185AQ8N0U4 392 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 OR5AS1Q8N127 324 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SPACA9Q96E40 222 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SLC45A3Q96JT2 553 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF285Q96NJ3 590 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 MNTQ99583 582 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ERVMER34-1Q9H9K5 563 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CRLF2Q9HC73 371 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 NUDT15Q9NV35 164 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 FKBP14Q9NWM8 211 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF346Q9UL40 294 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SHANK3Q9BYB0 1731 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 A0A1B0GWA3 101 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 LCN1P31025 176 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SRP9P49458 86 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 METAP1P53582 386 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TRMT12Q53H54 448 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 FAM69AQ5T7M9 428 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 UGT2A3Q6UWM9 527 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 PGAP1Q75T13 922 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TRILQ7L0X0 811 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SLC15A4Q8N697 577 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ZFP41Q8N8Y5 198 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RFT1Q96AA3 541 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 INTS12Q96CB8 462 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TRMT61AQ96FX7 289 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 MRGPRX4Q96LA9 322 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SORCS2Q96PQ0 1159 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CSF3RQ99062 836 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TREX2Q9BQ50 279 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 WACQ9BTA9 647 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ACOT13Q9NPJ3 140 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 INPP5EQ9NRR6 644 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RABL2AQ9UBK7 228 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RABL2BQ9UNT1 228 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 GPR45Q9Y5Y3 372 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 SHOXO15266 292 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CNR1P21554 472 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CDK2P24941 298 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 MTCP1P56278 107 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 CXCR4P61073 352 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RPS18P62269 152 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RAB31Q13636 194 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ARHGAP11BQ3KRB8 267 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 PIGGQ5H8A4 983 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 C22orf42Q6IC83 251 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 OR7E24Q6IFN5 339 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TUBA3EQ6PEY2 450 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 WDR74Q6RFH5 385 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 DPY19L2P2Q6ZN68 376 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 GJC3Q8NFK1 279 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TMEM163Q8TC26 289 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TRUB1Q8WWH5 349 aaKnown RBP4.62□□□□□ -1.67
SCN3A-203ENST00000409101 ST8SIA1Q92185 356 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 RND1Q92730 232 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 KATNB1Q9BVA0 655 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 PLEKHA3Q9HB20 300 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 HAO2Q9NYQ3 351 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 GNG12Q9UBI6 72 aa4.62□□□□□ -1.67
SCN3A-203ENST00000409101 TCRBV5S1A1TA0A578 114 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 MCRIP1C9JLW8 97 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 PPP6CO00743 305 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 CDX4O14627 284 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-203ENST00000409101 SGCEO43556 437 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 PRAMEF4O60810 478 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 RGS11O94810 467 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 SNAP29O95721 258 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 ARSBP15848 533 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 IDH3GP51553 393 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-203ENST00000409101 PNLIPRP2P54317 469 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 DUSP2Q05923 314 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 RIPPLY1Q0D2K3 151 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 STEAP3Q658P3 488 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 FRMPD2BQ6IN97 320 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 RGS7BPQ6MZT1 257 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-203ENST00000409101 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-203ENST00000409101 TMEM185AQ8NFB2 350 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 COQ8AQ8NI60 647 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 ZFP90Q8TF47 636 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 ROBO4Q8WZ75 1007 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 NEURL3Q96EH8 262 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 EGLN2Q96KS0 407 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 OPA3Q9H6K4 179 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 GNB4Q9HAV0 340 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 DCAF13Q9NV06 445 aaKnown RBP4.61□□□□□ -1.67
SCN3A-203ENST00000409101 TMEM30AQ9NV96 361 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 PCDHGA7Q9Y5G6 932 aa4.61□□□□□ -1.67
SCN3A-203ENST00000409101 LY75O60449 1722 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms