RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 GNB3P16520 340 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 CTSCP53634 463 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 EXOSC3Q9NQT5 275 aaKnown RBP12.05□□□□□ -0.48
RNF43-201ENST00000407977 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 SMAD6O43541 496 aaKnown RBP12.05□□□□□ -0.48
RNF43-201ENST00000407977 ZNF780AO75290 641 aaPredicted RBP12.05□□□□□ -0.48
RNF43-201ENST00000407977 ZNF217O75362 1048 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 CALCBP10092 127 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 ERVFC1P60507 584 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
RNF43-201ENST00000407977 PLCXD3Q63HM9 321 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 OR52H1Q8NGJ2 320 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 KATNB1Q9BVA0 655 aa12.05□□□□□ -0.48
RNF43-201ENST00000407977 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
RNF43-201ENST00000407977 SEMA4FO95754 770 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 DDAH2O95865 285 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 DBHP09172 617 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 MSX1P28360 303 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 SFTPDP35247 375 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 FOXK2Q01167 660 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 DSC1Q08554 894 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ADGRE4PQ86SQ3 457 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 MFSD9Q8NBP5 474 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 PSMF1Q92530 271 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 TMEM72A0PK05 275 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 RAF1P04049 648 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 CHRM2P08172 466 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 CPT2P23786 658 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 SQSTM1Q13501 440 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 CST9LP1Q5W188 147 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ADAM19Q9H013 955 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 NXF5Q9H1B4 397 aaKnown RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZNF629Q9UEG4 869 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 PRAMEF27A3QJZ7 478 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 I6L893 689 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZNF593O00488 134 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 MPPED1O15442 326 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZNF264O43296 627 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 GCH1P30793 250 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 PRAMEF9Q5VWM5 478 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 TMEM40Q8WWA1 233 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 OR1E3Q8WZA6 343 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 NKX3-1Q99801 234 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 DUSP21Q9H596 190 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 NIT2Q9NQR4 276 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 MYOTQ9UBF9 498 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 PURGQ9UJV8 347 aaKnown RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 ACTL7AQ9Y615 435 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 AIFM1O95831 613 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZNF28P17035 718 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 NDUFA6P56556 154 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 TGFBR3Q03167 851 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 RTL10Q7L3V2 364 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 RNF170Q96K19 258 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 ZIC5Q96T25 663 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
RNF43-201ENST00000407977 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF43-201ENST00000407977 EXO1Q9UQ84 846 aaKnown RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
RNF43-201ENST00000407977 IQCF3P0C7M6 154 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 ZNF44P15621 663 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 TIMP2P16035 220 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 VIPR2P41587 438 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 CCR6P51684 374 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 KIAA0141Q14154 515 aaPredicted RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 SFRP5Q5T4F7 317 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 SLCO4C1Q6ZQN7 724 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 Q6ZTK2 550 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 FAM3DQ96BQ1 224 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 SGK494L7N484 410 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 PRICKLE3O43900 615 aaPredicted RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 CCL5P13501 91 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 DPP4P27487 766 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 TAGLN2P37802 199 aaKnown RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 ATPAF1Q5TC12 328 aaPredicted RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 OPN5Q6U736 354 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 MCATQ8IVS2 390 aaKnown RBP12.03□□□□□ -0.48
RNF43-201ENST00000407977 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 ZNF439Q8NDP4 499 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 OR10R2Q8NGX6 335 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 OR10Z1Q8NGY1 313 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 ST8SIA4Q92187 359 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 ADOQ96SZ5 270 aa12.03□□□□□ -0.48
RNF43-201ENST00000407977 TMEM43Q9BTV4 400 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms