RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 RNF175Q8N4F7 328 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 NPBQ8NG41 125 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 LRRC58Q96CX6 371 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 OR2M2Q96R28 347 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 ACTR6Q9GZN1 396 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 AZI2Q9H6S1 392 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 FN3KRPQ9HA64 309 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 ZNF639Q9UID6 485 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 PIGLQ9Y2B2 252 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 KCNIP3Q9Y2W7 256 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 ASB3Q9Y575 518 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 SCN2AQ99250 2005 aa4□□□□□ -1.77
PTPN12-202ENST00000407343 NACAE9PAV3 2078 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 MTCL1Q9Y4B5 1905 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 A0A1B0GUA9 196 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 A0A1W2PPV9 198 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 CLRN2A0PK11 232 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RBMY1BA6NDE4 496 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RBMY1EA6NEQ0 496 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 TRIM49D1C9J1S8 452 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RBMY1DP0C7P1 496 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RBMY1A1P0DJD3 496 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 IL12AP29459 219 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RPS10P46783 165 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 ARRB1P49407 418 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 LHX2P50458 406 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 GPM6AP51674 278 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 DGUOKQ16854 277 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 MARCH8Q5T0T0 291 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 GPR157Q5UAW9 335 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 ZNF546Q86UE3 836 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 PAQR7Q86WK9 346 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 ECHDC2Q86YB7 292 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 BHLHE23Q8NDY6 225 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 FAM83FQ8NEG4 500 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 OR1L4Q8NGR5 311 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 ZNF606Q8WXB4 792 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 ACOT11Q8WXI4 607 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 NDRG1Q92597 394 aaKnown RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 IL22RA2Q969J5 263 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 CXorf40BQ96DE9 158 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 C12orf42Q96LP6 360 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 RPRD1AQ96P16 312 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-202ENST00000407343 CCT7Q99832 543 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 SRMSQ9H3Y6 488 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 PLGRKTQ9HBL7 147 aa3.99□□□□□ -1.77
PTPN12-202ENST00000407343 A0A0G2JN53 185 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 OR5B21A6NL26 309 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 C12orf77C9JDV5 145 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 RIPK2O43353 540 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 TDGF1P13385 188 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 TDGF1P3P51864 188 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 CRISP3P54108 245 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 IRX3P78415 501 aaPredicted RBP3.98□□□□□ -1.77
PTPN12-202ENST00000407343 NCBP1Q09161 790 aaKnown RBP3.98□□□□□ -1.77
PTPN12-202ENST00000407343 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 MAJINQ3KP22 176 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 OR2A2Q6IF42 318 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 Q6ZN92 141 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 EFL1Q7Z2Z2 1120 aaKnown RBP3.98□□□□□ -1.77
PTPN12-202ENST00000407343 BLOC1S5Q8TDH9 187 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 RNF185Q96GF1 192 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 RIOK2Q9BVS4 552 aaKnown RBP3.98□□□□□ -1.77
PTPN12-202ENST00000407343 NIPAL2Q9H841 368 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 LRRC40Q9H9A6 602 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 GIN1Q9NXP7 522 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
PTPN12-202ENST00000407343 A0A1B0GVL5 298 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 CRISP2P16562 243 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 TBPP20226 339 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 RDXP35241 583 aaKnown RBP3.97□□□□□ -1.77
PTPN12-202ENST00000407343 TAGLN2P37802 199 aaKnown RBP3.97□□□□□ -1.77
PTPN12-202ENST00000407343 CEBPDP49716 269 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-202ENST00000407343 MECOMQ03112 1051 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 ACVR1Q04771 509 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 ZNF77Q15935 545 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 Q6P435 159 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 C6orf89Q6UWU4 347 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 FANK1Q8TC84 345 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 NT5C3BQ969T7 300 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.97□□□□□ -1.772e-7■■■■■ 62.8
PTPN12-202ENST00000407343 ANKRD19PQ9H560 264 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 TMCO1Q9UM00 188 aa3.97□□□□□ -1.77
PTPN12-202ENST00000407343 B4GALT2O60909 372 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 KLF8O95600 359 aaPredicted RBP3.96□□□□□ -1.78
PTPN12-202ENST00000407343 IGHDP01880 384 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 FMO3P31513 532 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 REG3AQ06141 175 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 PPIL2Q13356 520 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 BOLA3Q53S33 107 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 ACOT4Q8N9L9 421 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 NMRAL1Q9HBL8 299 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 SGK2Q9HBY8 427 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 BFARQ9NZS9 450 aa3.96□□□□□ -1.78
PTPN12-202ENST00000407343 IGHV3-64DA0A0J9YX35 117 aa3.95□□□□□ -1.78
PTPN12-202ENST00000407343 OR52A4PA6NMU1 304 aa3.95□□□□□ -1.78
PTPN12-202ENST00000407343 FAM166BA8MTA8 275 aa3.95□□□□□ -1.78
PTPN12-202ENST00000407343 HOXC4P09017 264 aaPredicted RBP3.95□□□□□ -1.78
PTPN12-202ENST00000407343 ETS2P15036 469 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms