RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 SORBS1Q9BX66 1292 aaKnown RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 TM7SF3Q9NS93 570 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 BCAT2O15382 392 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 SLC10A3P09131 477 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 OR8U8P0C7N1 319 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 FCGR2AP12318 317 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 EDN3P14138 238 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 CLDN10P78369 228 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 BAXQ07812 192 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 PAGE3Q5JUK9 113 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 FAM74A1Q5RGS3 127 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 ST7LQ8TDW4 575 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 FAM183AA6NL82 134 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 MEIS3P2A8K0S8 358 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 B4GAT1O43505 415 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 NXPH2O95156 264 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 CARD18P57730 90 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 C9orf135Q5VTT2 229 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 PHOSPHO2Q8TCD6 241 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 CXXC1Q9P0U4 656 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 DOCK6Q96HP0 2047 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 IL4RP24394 825 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 CEACAM7Q14002 265 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 TMEM176BQ3YBM2 270 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 OR7E24Q6IFN5 339 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 FAM199XQ6PEV8 388 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 RANBP10Q6VN20 620 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 CNTN4Q8IWV2 1026 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 ABHD11Q8NFV4 315 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 H1FXQ92522 213 aaKnown RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 H0Y8G0 127 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 ZNF593O00488 134 aaPredicted RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 HLA-HP01893 362 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
SMCR8-201ENST00000406438 RAB13P51153 203 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 LSAMPQ13449 338 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 BPIFB2Q8N4F0 458 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 OR4F15Q8NGB8 312 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 RTP4Q96DX8 246 aa11.22□□□□□ -0.61
SMCR8-201ENST00000406438 NSA2O95478 260 aaKnown RBP11.21□□□□□ -0.61
SMCR8-201ENST00000406438 GPR75O95800 540 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 YPEL5P62699 121 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 NTHL1P78549 312 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 TBC1D28Q2M2D7 210 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 FAM234AQ9H0X4 552 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 SERPINF1P36955 418 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 UBE2KP61086 200 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 RAP2BP61225 183 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 HBA1P69905 142 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 HNF4GQ14541 408 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 TAZQ16635 292 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
SMCR8-201ENST00000406438 FJX1Q86VR8 437 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 TWSG1Q9GZX9 223 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 CLMPQ9H6B4 373 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 TMEM82A0PJX8 343 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 AGAP14A8MT82 685 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 YKT6O15498 198 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 CLDN1O95832 211 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 AADACP22760 399 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 CLDN17P56750 224 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 WDR5BQ86VZ2 330 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 SELENOIQ9C0D9 397 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 NIPAL2Q9H841 368 aa11.21□□□□□ -0.61
SMCR8-201ENST00000406438 GABRPO00591 440 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 SMAD6O43541 496 aaKnown RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 F3P13726 295 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 TNFRSF17Q02223 184 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 PGGHGQ32M88 737 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 CPEB3Q8NE35 698 aaKnown RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 STT3BQ8TCJ2 826 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 MITD1Q8WV92 249 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 OR2M2Q96R28 347 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 OR52A5Q9H2C5 316 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 SLC39A9Q9NUM3 307 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 MEIOCA2RUB1 952 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 IDO2Q6ZQW0 420 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 OR8J2Q8NGG1 315 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 C3orf49Q96BT1 292 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 RAB19A4D1S5 217 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 PRICKLE3O43900 615 aaPredicted RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 SNCGO76070 127 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 AOAHP28039 575 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 HOXC8P31273 242 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF133P52736 654 aaPredicted RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 GPR19Q15760 415 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 TATDN3Q17R31 274 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 SPARTQ8N0X7 666 aa11.21□□□□□ -0.62
SMCR8-201ENST00000406438 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.62
SMCR8-201ENST00000406438 ISYNA1Q9NPH2 558 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms