RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CDK20Q8IZL9 346 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 ZNF614Q8N883 585 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 SGTBQ96EQ0 304 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 FRRS1LQ9P0K9 344 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 U3KQ87 197 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 GON4LQ3T8J9 2241 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 SERINC4A6NH21 518 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 IFITM5A6NNB3 132 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 ADAM10O14672 748 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 GATBO75879 557 aaKnown RBP8.97□□□□□ -0.97
MSH2-202ENST00000406134 GDNFP39905 211 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.97□□□□□ -0.97
MSH2-202ENST00000406134 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
MSH2-202ENST00000406134 ADAMTS14Q8WXS8 1223 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 Q96M85 177 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 IRF2BPLQ9H1B7 796 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 C20orf85Q9H1P6 137 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 NKX2-4Q9H2Z4 354 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 OR5V1Q9UGF6 321 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 GMEB2Q9UKD1 530 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 AIPO00170 330 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 FLRT2O43155 660 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 RAG2P55895 527 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 CLDN12P56749 244 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 DYRK1AQ13627 763 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 ZNF74Q16587 644 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 MESTQ5EB52 335 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 HES5Q5TA89 166 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 PWWP2BQ6NUJ5 590 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 ZNF527Q8NB42 609 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 OR2T4Q8NH00 348 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 LCORQ96JN0 433 aaPredicted RBP8.97□□□□□ -0.97
MSH2-202ENST00000406134 CMTM3Q96MX0 182 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 SORCS2Q96PQ0 1159 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 OR2M2Q96R28 347 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 LMAN2LQ9H0V9 348 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 DPAGT1Q9H3H5 408 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
MSH2-202ENST00000406134 ZNF275Q9NSD4 429 aaPredicted RBP8.97□□□□□ -0.97
MSH2-202ENST00000406134 PIPOXQ9P0Z9 390 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 MGAT4AQ9UM21 535 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 FOXJ3Q9UPW0 622 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 HS3ST3A1Q9Y663 406 aa8.97□□□□□ -0.97
MSH2-202ENST00000406134 SDK1Q7Z5N4 2213 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 TRBV5-5A0A0J9YX44 114 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 SPTY2D1-AS1A0A0U1RR47 76 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 EFCAB7A8K855 629 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 ZNF879B4DU55 563 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 GPANK1O95872 356 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 TPOP07202 933 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 TALDO1P37837 337 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 OR3A3P47888 321 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 GAS6Q14393 721 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 SLC35D3Q5M8T2 416 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 KIAA1324Q6UXG2 1013 aaKnown RBP8.96□□□□□ -0.97
MSH2-202ENST00000406134 CDC20BQ86Y33 519 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 TOMM5Q8N4H5 51 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 ZNF511Q8NB15 262 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 OR10AC1Q8NH08 325 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 OR52I2Q8NH67 350 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 ZFP3Q96NJ6 502 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 CACYBPQ9HB71 228 aaKnown RBP8.96□□□□□ -0.97
MSH2-202ENST00000406134 HRASLSQ9HDD0 168 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 NANSQ9NR45 359 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 MRPL15Q9P015 296 aaKnown RBP8.96□□□□□ -0.97
MSH2-202ENST00000406134 KLK11Q9UBX7 282 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 ERVK-19Q9WJR5 959 aa8.96□□□□□ -0.97
MSH2-202ENST00000406134 TCRBV21S2A2A0A5A6 115 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CTNSO60931 367 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 GLCEO94923 617 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CFDP00746 253 aaPredicted RBP8.96□□□□□ -0.98
MSH2-202ENST00000406134 IGF2P01344 180 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 EDNRAP25101 427 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 STOMP27105 288 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 LTBRP36941 435 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CAPZA2P47755 286 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CCR9P51686 369 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CCINQ13939 588 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.96□□□□□ -0.98
MSH2-202ENST00000406134 RFPL4BQ6ZWI9 263 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 PRSS35Q8N3Z0 413 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 OR51A4Q8NGJ6 313 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 AMELYQ99218 206 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 OR10A5Q9H207 317 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 CDCP1Q9H5V8 836 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 LIN7BQ9HAP6 207 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.96□□□□□ -0.98
MSH2-202ENST00000406134 ZNF337Q9Y3M9 751 aa8.96□□□□□ -0.98
MSH2-202ENST00000406134 TRAV8-7A0A075B6U6 113 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 IFNGP01579 166 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 IGLV3-19P01714 112 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 AQP2P41181 271 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 IL10RAQ13651 578 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 FAAP20Q6NZ36 180 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 MRPL38Q96DV4 380 aaKnown RBP8.95□□□□□ -0.98
MSH2-202ENST00000406134 TSPAN32Q96QS1 320 aa8.95□□□□□ -0.98
MSH2-202ENST00000406134 UTP23Q9BRU9 249 aaKnown RBP8.95□□□□□ -0.98
MSH2-202ENST00000406134 LRRC61Q9BV99 259 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms