RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TRIM49D1C9J1S8 452 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 GOLGA8KD6RF30 607 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 GOLGA8TH3BQL2 631 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CCSO14618 274 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PRMT5O14744 637 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 LATO43561 262 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 KIAA0513O60268 411 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A9O60656 530 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ATP6V1G1O75348 118 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TXNDC12O95881 172 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 HOXC4P09017 264 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 GPR89BP0CG08 455 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CT45A8P0DMV1 189 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CT45A9P0DMV2 189 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF7P17097 686 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TRIM23P36406 574 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC1A2P43004 574 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 MAGEA12P43365 314 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZFP36L2P47974 494 aaKnown RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PITPNBP48739 271 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CSRP3P50461 194 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 METAP1P53582 386 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC18A1P54219 525 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SRPXP78539 464 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 RAPSNQ13702 412 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC17A1Q14916 467 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZKSCAN8Q15776 578 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CHRNA6Q15825 494 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 POM121L1PQ3SYA9 428 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CT45A2Q5DJT8 189 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 LDLRAP1Q5SW96 308 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PRAMEF7Q5VXH5 474 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 FAM45BPQ6NSW5 357 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 FAM151BQ6UXP7 276 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 HSD11B1LQ7Z5J1 315 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SERPINA9Q86WD7 417 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 C17orf64Q86WR6 236 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 HORMAD1Q86X24 394 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 RNF130Q86XS8 419 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PIANPQ8IYJ0 282 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PARP8Q8N3A8 854 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 OTUD6BQ8N6M0 293 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 FAM45AQ8TCE6 357 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TLCD1Q96CP7 247 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 NUS1Q96E22 293 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 COX14Q96I36 57 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 VPS39Q96JC1 886 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF514Q96K75 400 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 ATP6V1G3Q96LB4 118 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 GPR22Q99680 433 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SOSTQ9BQB4 213 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 WRAP53Q9BUR4 548 aaKnown RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 RIOK2Q9BVS4 552 aaKnown RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 FUNDC2Q9BWH2 189 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SPATA16Q9BXB7 569 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC17A9Q9BYT1 436 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 STRADBQ9C0K7 418 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TUBB1Q9H4B7 451 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 MOB1AQ9H8S9 216 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A7Q9HAW7 530 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A10Q9HAW8 530 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A8Q9HAW9 530 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 POPDC3Q9HBV1 291 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 NDUFA13Q9P0J0 144 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TEKT2Q9UIF3 430 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CRLS1Q9UJA2 301 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 KLK13Q9UKR3 277 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 TDRKHQ9Y2W6 561 aaKnown RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 MTF2Q9Y483 593 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 CACNA1HO95180 2353 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 UNC13CQ8NB66 2214 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 MDC1Q14676 2089 aaKnown RBP3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 ADAMTS9Q9P2N4 1935 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 IGHV1OR15-9A0A0B4J2B8 117 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 A0A0U1RQS6 177 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 A0A1W2PPR1 153 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR51F1A6NGY5 319 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SHISA9B4DS77 424 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 CCL22O00626 93 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 PIAS1O75925 651 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC25A14O95258 325 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 WISP3O95389 354 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SEMA4FO95754 770 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SOD1P00441 154 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC4A1P02730 911 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 MT-ND3P03897 115 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 GSTA1P08263 222 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 RALBP11234 206 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 STMN1P16949 149 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 HNRNPA2B1P22626 353 aaKnown RBP3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 CRABP2P29373 138 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A3P35503 534 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 UGT1A5P35504 534 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC26A3P40879 764 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 GPR1P46091 355 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLCO1A2P46721 670 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 SERPINB8P50452 374 aa3.98□□□□□ -1.77
HMGB3P19-201ENST00000403971 RAB10P61026 200 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms