RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 MRPL2Q5T653 305 aaKnown RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 SFXN4Q6P4A7 337 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 OR7D2Q96RA2 312 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 TIMP2P16035 220 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 GM2AP17900 193 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 LAP3P28838 519 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 RPE65Q16518 533 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 C15orf39Q6ZRI6 1047 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 SSX9Q7RTT3 188 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 TP53INP2Q8IXH6 220 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 OR2T11Q8NH01 316 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 MED17Q9NVC6 651 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 GNG12Q9UBI6 72 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 ARFGEF3Q5TH69 2177 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 GLSO94925 669 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 IKZF1Q13422 519 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 HNF4GQ14541 408 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 LTB4RQ15722 352 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 PLK5Q496M5 336 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 GCNT2Q8N0V5 402 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 CNEP1R1Q8N9A8 125 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 DMBX1Q8NFW5 382 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 OR1S2Q8NGQ3 325 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 I6L893 689 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 ADAMTS4O75173 837 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 SLC2A1P11166 492 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 CLDN10P78369 228 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 SF3B4Q15427 424 aaKnown RBP eCLIP8.95□□□□□ -0.986e-6■■□□□ 11.8
CSMD1-202ENST00000400186 RNF141Q8WVD5 230 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 CCNL2Q96S94 520 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 CMSS1Q9BQ75 279 aaKnown RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 ALG12Q9BV10 488 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 GPR62Q9BZJ7 368 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 PATZ1Q9HBE1 687 aaKnown RBP8.95□□□□□ -0.98
CSMD1-202ENST00000400186 PCDHB10Q9UN67 800 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 LRP6O75581 1613 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 LRP5LA4QPB2 252 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 NUDT1P36639 197 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 OR2G6Q5TZ20 316 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 CNTN4Q8IWV2 1026 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 FOXJ1Q92949 421 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 TREX1Q9NSU2 369 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 EMCNQ9ULC0 261 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 HTR2CP28335 458 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 PIANPQ8IYJ0 282 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 MED30Q96HR3 178 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 TPPP3Q9BW30 176 aa8.95□□□□□ -0.98
CSMD1-202ENST00000400186 TXNDC12O95881 172 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 HTR4Q13639 388 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 C3orf30Q96M34 536 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 C16orf70Q9BSU1 422 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 NDUFA6P56556 154 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 SLC5A12Q1EHB4 618 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 OR52R1Q8NGF1 315 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 PCNPQ8WW12 178 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 NFYBP25208 207 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 GABRA2P47869 451 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 P2RX1P51575 399 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ADIRFQ15847 76 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 OR5M10Q6IEU7 315 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 RBMXL3Q8N7X1 1067 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 OR52H1Q8NGJ2 320 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 PIGCQ92535 297 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 MRPL38Q96DV4 380 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 SGPP1Q9BX95 441 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 EXO1Q9UQ84 846 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 CCR6P51684 374 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ILKQ13418 452 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 INTS12Q96CB8 462 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 NAA50Q9GZZ1 169 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 PIAS3Q9Y6X2 628 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ACOD1A6NK06 481 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ARNTLO00327 626 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 KCNK5O95279 499 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ZNF266Q14584 549 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ZNF852Q6ZMS4 543 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 Q6ZSR6 202 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 KATNB1Q9BVA0 655 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 MROH6A6NGR9 719 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 C1orf105O95561 183 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 P2RY2P41231 377 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 BAXQ07812 192 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 LEXMQ3ZCV2 418 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 ZMAT1Q5H9K5 638 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 MAMDC4Q6UXC1 1216 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 SHISA6Q6ZSJ9 500 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 NAA40Q86UY6 237 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 LFNGQ8NES3 379 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 CPNE4Q96A23 557 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-202ENST00000400186 CA14Q9ULX7 337 aa8.94□□□□□ -0.98
CSMD1-202ENST00000400186 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms