RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CAPSLQ8WWF8 208 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ZNF845Q96IR2 970 aaPredicted RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 KATNB1Q9BVA0 655 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 GABARAPL3Q9BY60 117 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 OR51V1Q9H2C8 321 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 QPCTLQ9NXS2 382 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 SH3D21A4FU49 640 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 EIF4E2O60573 245 aaKnown RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ADORA3P0DMS8 318 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 HIST1H1CP16403 213 aaKnown RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 ENPP1P22413 925 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 PRKACBP22694 351 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 GGT2P36268 569 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 NKX2-5P52952 324 aaPredicted RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 SUCLG1P53597 346 aaKnown RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 SMIM11AP58511 58 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 LGALS3BPQ08380 585 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 MYBPHQ13203 477 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 NEDD8Q15843 81 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 SIGIRRQ6IA17 410 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 PLBD1Q6P4A8 553 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 RTL4Q6ZR62 310 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 SYT14Q8NB59 555 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 OR2M7Q8NG81 312 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 TXNDC15Q96J42 360 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 HS6ST2Q96MM7 605 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ERMAPQ96PL5 475 aaPredicted RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 NMNAT3Q96T66 252 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 DGCR6LQ9BY27 220 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ALKBH4Q9NXW9 302 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 CHRNA9Q9UGM1 479 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 POLHQ9Y253 713 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 PNMA8CA0A1B0GUJ8 204 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 A0A1W2PPW3 197 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 SLC16A6O15403 523 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 DPM1O60762 260 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 INHBBP09529 407 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 CD79BP40259 229 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 MEOX1P50221 254 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 IFITM2Q01629 132 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 RPL18Q07020 188 aaKnown RBP10.52□□□□□ -0.72
SKA3-203ENST00000400018 KLHL12Q53G59 568 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 C6orf141Q5SZD1 244 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 C1orf140Q5VVS0 124 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 TTC23Q5W5X9 447 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 SLC15A4Q8N697 577 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 SPERTQ8NA61 448 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 ZNF248Q8NDW4 579 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 SNIP1Q8TAD8 396 aaKnown RBP10.52□□□□□ -0.72
SKA3-203ENST00000400018 TEX47Q8TBZ9 253 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 DNAJA4Q8WW22 397 aaPredicted RBP10.52□□□□□ -0.72
SKA3-203ENST00000400018 LRR1Q96L50 414 aa10.52□□□□□ -0.72
SKA3-203ENST00000400018 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 DCTN6O00399 190 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 FMO6PO60774 539 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 TRIM3O75382 744 aaPredicted RBP10.52□□□□□ -0.73
SKA3-203ENST00000400018 CD63P08962 238 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 FPR3P25089 353 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
SKA3-203ENST00000400018 CLDN15P56746 228 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 PLGLB1Q02325 96 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 ETFDHQ16134 617 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 GRINAQ7Z429 371 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 CPOQ8IVL8 374 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 OR52E2Q8NGJ4 325 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 LILRB4Q8NHJ6 448 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 TTTY12Q9BZ98 90 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 HINT3Q9NQE9 182 aaKnown RBP10.52□□□□□ -0.73
SKA3-203ENST00000400018 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.73
SKA3-203ENST00000400018 TEKT2Q9UIF3 430 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 ING1Q9UK53 422 aaPredicted RBP10.52□□□□□ -0.73
SKA3-203ENST00000400018 ERGIC3Q9Y282 383 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 MYRFQ9Y2G1 1151 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 ZGRF1Q86YA3 2104 aa10.52□□□□□ -0.73
SKA3-203ENST00000400018 TEX13CA0A0J9YWL9 993 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 OR5H15A6NDH6 313 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 PSMD9O00233 223 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 SLC1A7O00341 560 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 PTP4A3O75365 173 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 STSP08842 583 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 NAGAP17050 411 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CD82P27701 267 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CTXN1P60606 82 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CRMP1Q14194 572 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CARD17Q5XLA6 110 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 UTS2BQ765I0 119 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CDK20Q8IZL9 346 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 ZNF540Q8NDQ6 660 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 RNF138Q8WVD3 245 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 ROBO4Q8WZ75 1007 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TAPBPLQ9BX59 468 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TAS2R5Q9NYW4 299 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 DAPK2Q9UIK4 370 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CLEC4AQ9UMR7 237 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 SNPHO15079 494 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms