RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 DPAGT1Q9H3H5 408 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 A6NCN8 305 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 M0R082 166 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CDC42EP2O14613 210 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 FARS2O95363 451 aaKnown RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 SYNGR4O95473 234 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CLUP10909 449 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 TSPAN5P62079 268 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CDK5Q00535 292 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CD83Q01151 205 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CTF1Q16619 201 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 RAB11FIP2Q7L804 512 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF417Q8TAU3 575 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF587Q96SQ5 575 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-202ENST00000399804 CDCP1Q9H5V8 836 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 MOKQ9UQ07 419 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 SLCO1B1Q9Y6L6 691 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 ANAPC1Q9H1A4 1944 aa12.84□□□□□ -0.35
SCAF4-202ENST00000399804 OR2J2O76002 312 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 TBX6O95947 436 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 DRD5P21918 477 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 STARD6P59095 220 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 OR5M1Q8NGP8 315 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 VSTM2LQ96N03 204 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 DNAJB12Q9NXW2 375 aaKnown RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 CENPVL1A0A0U1RR11 272 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 PATE3B3GLJ2 98 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 INMT-MINDY4F8WBC2 141 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 ABCD3P28288 659 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 TGFBR2P37173 567 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 SLC22A10Q63ZE4 541 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 PGAM5Q96HS1 289 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 NEURL2Q9BR09 285 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 PDCD10Q9BUL8 212 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 IFT46Q9NQC8 304 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 SIGLEC7Q9Y286 467 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 ECDO95905 644 aaPredicted RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 EEF1A1P68104 462 aaKnown RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
SCAF4-202ENST00000399804 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 XKRXQ6PP77 449 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 OR8D4Q8NGM9 314 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 OR13C3Q8NGS6 347 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 DYNC2LI1Q8TCX1 351 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 SLC41A2Q96JW4 573 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 LMF1Q96S06 567 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 SEMA4CQ9C0C4 833 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 NLKQ9UBE8 527 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
SCAF4-202ENST00000399804 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 A0A087WUJ7 227 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 DCDC2BA2VCK2 349 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 A8MV72 311 aaPredicted RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 HEPHL1Q6MZM0 1159 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 C5orf46Q6UWT4 87 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 TMPRSS11FQ6ZWK6 438 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 SLC43A2Q8N370 569 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 GPR137CQ8N3F9 429 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 TMEM41AQ96HV5 264 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 WFDC6Q9BQY6 131 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 REV1Q9UBZ9 1251 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 OSGIN1Q9UJX0 560 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 GJE1A6NN92 205 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 LRRTM2O43300 516 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 GLCEO94923 617 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF658BQ4V348 819 aaPredicted RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 PEG10Q86TG7 708 aaKnown RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 SERPINA12Q8IW75 414 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 PDCD1LG2Q9BQ51 273 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF160Q9HCG1 818 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 MRPL15Q9P015 296 aaKnown RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 SDK2Q58EX2 2172 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 GDF1P27539 372 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 HSF2Q03933 536 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 PUDPQ08623 228 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
SCAF4-202ENST00000399804 DGAT2L6Q6ZPD8 337 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 CARFQ8N187 725 aa12.82□□□□□ -0.36
SCAF4-202ENST00000399804 SLC25A45Q8N413 288 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms