RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MYOTQ9UBF9 498 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 LSM2Q9Y333 95 aaKnown RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 LOC400499M0QZD8 3231 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 C9J4A7 227 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 LTBQ06643 244 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 ISXQ2M1V0 245 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 DCAF12Q5T6F0 453 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CXXC5Q7LFL8 322 aaKnown RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 GHDCQ8N2G8 530 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CPNE5Q9HCH3 593 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 TOR4AQ9NXH8 423 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 C19orf25Q9UFG5 118 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CUL9Q8IWT3 2517 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 IMPA2O14732 288 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 GADD45AP24522 165 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 SOX3P41225 446 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OR3A3P47888 321 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 DACT3Q96B18 629 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-201ENST00000399126 RNF167Q9H6Y7 350 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 EMC3Q9P0I2 261 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OSGIN1Q9UJX0 560 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CFAP47Q6ZTR5 3102 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 IGHV1-45A0A0A0MS14 117 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 BET1O15155 118 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 HMGN1P05114 100 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 GYPBP06028 91 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 COX6A1P12074 109 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 LCN1P31025 176 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CDC20Q12834 499 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CRMP1Q14194 572 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CDK10Q15131 360 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 TSTQ16762 297 aaKnown RBP13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OR2G6Q5TZ20 316 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 LYPD8Q6UX82 237 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 C10orf53Q8N6V4 93 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OR10G3Q8NGC4 313 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OR5W2Q8NH69 310 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 MOSPD2Q8NHP6 518 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 OIT3Q8WWZ8 545 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 PTP4A1Q93096 173 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 HGDQ93099 445 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 MGLLQ99685 303 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 TEX12Q9BXU0 123 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 ADAM19Q9H013 955 aa13.75□□□□□ -0.21
COL25A1-201ENST00000399126 DIMT1Q9UNQ2 313 aaKnown RBP13.75□□□□□ -0.21
COL25A1-201ENST00000399126 CAB39Q9Y376 341 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-201ENST00000399126 LOC102723996A0A087X1L8 192 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 NDUFA2O43678 99 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ZFAND5O76080 213 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RAB36O95755 333 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 QPRTQ15274 297 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RSBN1Q5VWQ0 802 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RTL4Q6ZR62 310 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 OR2Y1Q8NGV0 311 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 DEFB126Q9BYW3 111 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 OR51E2Q9H255 320 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 PARD6AQ9NPB6 346 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 CMC2Q9NRP2 79 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 MED17Q9NVC6 651 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ERVH48-1M5A8F1 160 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 OR7A10O76100 309 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 PNMTP11086 282 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RPS5P46782 204 aaKnown RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RGS6P49758 472 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ZNF124Q15973 351 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SSX1Q16384 188 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ZNF74Q16587 644 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 KLHL12Q53G59 568 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 NXNL2Q5VZ03 156 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 NIPAL3Q6P499 406 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ZNF367Q7RTV3 350 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 C9orf43Q8TAL5 461 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ELP5Q8TE02 316 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 ERMAPQ96PL5 475 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SLA2Q9H6Q3 261 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 FOXJ2Q9P0K8 574 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 AKAP7Q9P0M2 348 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-201ENST00000399126 SEC14L4Q9UDX3 406 aa13.74□□□□□ -0.21
COL25A1-201ENST00000399126 PCSK5Q92824 1860 aa13.73□□□□□ -0.21
COL25A1-201ENST00000399126 A0A1W2PQ72 361 aa13.73□□□□□ -0.21
COL25A1-201ENST00000399126 C9orf172C9J069 976 aa13.73□□□□□ -0.21
COL25A1-201ENST00000399126 BLOC1S5-TXNDC5H3BN57 136 aa13.73□□□□□ -0.21
COL25A1-201ENST00000399126 LRRTM2O43300 516 aa13.73□□□□□ -0.21
COL25A1-201ENST00000399126 EIF4E2O60573 245 aaKnown RBP13.73□□□□□ -0.21
COL25A1-201ENST00000399126 OPRL1P41146 370 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms