RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SUMO3P55854 103 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 YIF1BQ5BJH7 314 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ZNF684Q5T5D7 378 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR4D9Q8NGE8 314 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR8K3Q8NH51 312 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NUBPLQ8TB37 319 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 Q96M85 177 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM210AQ96ND0 272 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MOGAT1Q96PD6 335 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RBFOX1Q9NWB1 397 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 A8MU76 341 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LRRN3E7EW58 273 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ZNF432O94892 652 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ITPKBP27987 946 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 THBS2P35442 1172 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ACVR1BP36896 505 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 INPP1P49441 399 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RPL18Q07020 188 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 INSL4Q14641 139 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SGCBQ16585 318 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TP53I3Q53FA7 332 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SSX6Q7RTT6 188 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KANSL1Q7Z3B3 1105 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GRINAQ7Z429 371 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR6K6Q8NGW6 343 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 STT3BQ8TCJ2 826 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NAT6Q93015 286 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RASD2Q96D21 266 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LRRN3Q9H3W5 708 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TEKT2Q9UIF3 430 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GNG8Q9UK08 70 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ZNF281Q9Y2X9 895 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CUL9Q8IWT3 2517 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ABCA7Q8IZY2 2146 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 HMX3A6NHT5 357 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 A8MVM7 634 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PLA2G10O15496 165 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FLRT2O43155 660 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CPNE3O75131 537 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NCR1O76036 304 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 BGLAPP02818 100 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EDNRAP25101 427 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MAP2K3P46734 347 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PITPNBP48739 271 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PITPNAQ00169 270 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EGR3Q06889 387 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MFSD13AQ14CX5 517 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM69AQ5T7M9 428 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PYHIN1Q6K0P9 492 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM220AQ7Z4H9 259 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LSM14AQ8ND56 463 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ENKURQ8TC29 256 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TAAR8Q969N4 342 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KTI12Q96EK9 354 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NUDT22Q9BRQ3 303 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 C11orf54Q9H0W9 315 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MARCH7Q9H992 704 aa16.1■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TP53BP1Q12888 1972 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 A0A0G2JK05 382 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CCNKO75909 580 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KRT8P05787 483 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ELK1P19419 428 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MAPK3P27361 379 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EVI2BP34910 448 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NAA10P41227 235 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 DLX5P56178 289 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RNF4P78317 190 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 DAB2P98082 770 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LTBQ06643 244 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 QPRTQ15274 297 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TAB1Q15750 504 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PLET1Q6UQ28 207 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MARCH3Q86UD3 253 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NR2C2APQ86WQ0 139 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CELF2-AS1Q8N7Q2 184 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 METTL21AQ8WXB1 218 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ST8SIA1Q92185 356 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FRMD6Q96NE9 622 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PHOX2BQ99453 314 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RNF121Q9H920 327 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EXTL2Q9UBQ6 330 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RASD1Q9Y272 281 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 COL6A3P12111 3177 aa16.09■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SMIM30A4D0T7 59 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CENPBD1B2RD01 187 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NPIPB7O75200 414 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 C17orf67Q0P5P2 114 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NKAIN1Q4KMZ8 207 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EEF1A1P5Q5VTE0 462 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 C1orf189Q5VU69 101 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 COX15Q7KZN9 410 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR5L2Q8NGL0 311 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GPR119Q8TDV5 335 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TTC9Q92623 222 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KLHL15Q96M94 604 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PPIL3Q9H2H8 161 aaKnown RBP16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RPRD1BQ9NQG5 326 aaKnown RBP16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RARRES3Q9UL19 164 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms