RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 GRIP2Q9C0E4 1043 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 EVA1AQ9H8M9 152 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 TMEM27Q9HBJ8 222 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 SLC17A5Q9NRA2 495 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF587BE7ETH6 402 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 AIM2O14862 343 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 MFN2O95140 757 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF43P17038 809 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 CDKN1AP38936 164 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 SELENOPP49908 381 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 PPP2R2BQ00005 443 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 NFYCQ13952 458 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 AGAP6Q5VW22 663 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 NIPAL3Q6P499 406 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 DTX2Q86UW9 622 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 RETREG3Q86VR2 466 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 RANBP3LQ86VV4 465 aaPredicted RBP11.75□□□□□ -0.53
VCX3A-202ENST00000398729 EPHX4Q8IUS5 362 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 RNF217Q8TC41 542 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 SLC47A1Q96FL8 570 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 TRAF4Q9BUZ4 470 aaPredicted RBP11.75□□□□□ -0.53
VCX3A-202ENST00000398729 OBP2BQ9NPH6 170 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 CADP27708 2225 aa11.75□□□□□ -0.53
VCX3A-202ENST00000398729 TRAV36DV7A0A075B6V5 113 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 E7EQL1 145 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 FZD7O75084 574 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 CRLF1O75462 422 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 TROVE2P10155 538 aaKnown RBP eCLIP11.74□□□□□ -0.53
VCX3A-202ENST00000398729 CLDN17P56750 224 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 MTPNP58546 118 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 DMTNQ08495 405 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 SPOCK1Q08629 439 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 C1DQ13901 141 aaKnown RBP11.74□□□□□ -0.53
VCX3A-202ENST00000398729 VEZF1Q14119 521 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 MFSD13AQ14CX5 517 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 CLEC12BQ2HXU8 276 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 H1FNTQ75WM6 255 aaPredicted RBP11.74□□□□□ -0.53
VCX3A-202ENST00000398729 PTOV1Q86YD1 416 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 SLC30A8Q8IWU4 369 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 KDM8Q8N371 416 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 SMYD1Q8NB12 490 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 TAAR8Q969N4 342 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 BOD1Q96IK1 185 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 ALKBH3Q96Q83 286 aaPredicted RBP11.74□□□□□ -0.53
VCX3A-202ENST00000398729 EPYCQ99645 322 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 DHRS9Q9BPW9 319 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 MRGBPQ9NV56 204 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 RCE1Q9Y256 329 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 ANK2Q01484 3957 aa11.74□□□□□ -0.53
VCX3A-202ENST00000398729 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 A0A087WUJ7 227 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 A0A0B4J2E0 115 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 A0A1B0GX12 115 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 M0QX08 132 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 M0R082 166 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 LGI1O95970 557 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 CD8AP01732 235 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 CBLP22681 906 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 PAX7P23759 505 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 GRPRP30550 384 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 TTKP33981 857 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 FABP6P51161 128 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 PCBP3P57721 371 aaKnown RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 SLC25A3Q00325 362 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 IL1RL1Q01638 556 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 LGALS3BPQ08380 585 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 CHD3Q12873 2000 aaKnown RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 TNK1Q13470 666 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 SELPLGQ14242 412 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 HMBOX1Q6NT76 420 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 OR1K1Q8NGR3 316 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 OR6S1Q8NH40 331 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF417Q8TAU3 575 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 HS6ST2Q96MM7 605 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF317Q96PQ6 595 aaPredicted RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 KAT8Q9H7Z6 458 aaKnown RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 BARX1Q9HBU1 254 aaPredicted RBP11.73□□□□□ -0.53
VCX3A-202ENST00000398729 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 KLHL14Q9P2G3 628 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 SEC14L4Q9UDX3 406 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 CORINQ9Y5Q5 1042 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
VCX3A-202ENST00000398729 HEATR1Q9H583 2144 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 LOC102725191A0A1B0GVB3 256 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 M0R3H8 397 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 AKAP8O43823 692 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 TPST2O60704 377 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms