RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FRMD1Q8N878 549 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 H0YIG0 161 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC22A5O76082 557 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNK2O95069 426 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 NPR2P20594 1047 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 FAM53BQ14153 422 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 MELKQ14680 651 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR2S2Q9NQN1 319 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PADI1Q9ULC6 663 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 NCR1O76036 304 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 GIFP27352 417 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 MSX1P28360 303 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PPICP45877 212 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PCBD1P61457 104 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC35A1P78382 337 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 ARG2P78540 354 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 SFXN4Q6P4A7 337 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 NRARPQ7Z6K4 114 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 TEAD3Q99594 435 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 ACAD8Q9UKU7 415 aa13.12□□□□□ -0.31
PCDHGA11-201ENST00000398587 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNE1BA0A087WTH5 132 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 GLCEO94923 617 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SBK2P0C263 348 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 RUNX2Q13950 521 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 PRSS36Q5K4E3 855 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TMEM201Q5SNT2 666 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 MARCH3Q86UD3 253 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 APMAPQ9HDC9 416 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 A0A0A6YYD5 115 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SNRPBP14678 240 aaKnown RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 DPP4P27487 766 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 GP2P55259 537 aaKnown RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TGFBR3Q03167 851 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 MEF2DQ14814 521 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 NOXA1Q86UR1 476 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 PHB2Q99623 299 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 ENKD1Q9H0I2 346 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 NTN4Q9HB63 628 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 UBE2J1Q9Y385 318 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 A0A0G2JMP0 313 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 GABRG2P18507 467 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 MTFR2Q6P444 385 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 OR4M2Q8NGB6 313 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 PRRT1Q99946 306 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TTLL8A6PVC2 850 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 WDPCPO95876 746 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TFP02787 698 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 CD79AP11912 226 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 HNRNPFP52597 415 aaKnown RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 EIF4EBP2Q13542 120 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 TATDN3Q17R31 274 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 C3orf33Q6P1S2 294 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 PHC2Q8IXK0 858 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 VSX1Q9NZR4 365 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SERGEFQ9UGK8 458 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 NPFFR2Q9Y5X5 522 aa13.11□□□□□ -0.31
PCDHGA11-201ENST00000398587 hCG_1807616A0A1W2PRN6 198 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 PPM1DO15297 605 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 TBX19O60806 448 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 PAHP00439 452 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 MSRB3Q8IXL7 192 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 NT5CQ8TCD5 201 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 LTB4R2Q9NPC1 389 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 KCNS2Q9ULS6 477 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 WIF1Q9Y5W5 379 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 A6NL46 340 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 IGFBP1P08833 259 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 HOXB9P17482 250 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 APEX1P27695 318 aaKnown RBP13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 SLC26A5P58743 744 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 TAS2R31P59538 309 aa13.1□□□□□ -0.31
PCDHGA11-201ENST00000398587 CNN3Q15417 329 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms