RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TMEM50AO95807 157 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 CST1P01037 141 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 IGLV1-47P01700 117 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 KLK3P07288 261 aaPredicted RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 ZNF19P17023 458 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 ELK1P19419 428 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 NCF2P19878 526 aaPredicted RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 COX7A1P24310 79 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 ARRB1P49407 418 aaPredicted RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 SUCLG1P53597 346 aaKnown RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 RAP1BP61224 184 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 MRPL28Q13084 256 aaKnown RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 LRRK1Q38SD2 2015 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 KCTD21Q4G0X4 260 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 SAMD4BQ5PRF9 694 aaKnown RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 CCDC183Q5T5S1 534 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 TIGD3Q6B0B8 471 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 C1orf94Q6P1W5 598 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 UQCC3Q6UW78 93 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 TMIGD1Q6UXZ0 262 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 NANOGNBQ7Z5D8 188 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PAQR7Q86WK9 346 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 KRTAP11-1Q8IUC1 163 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PSTKQ8IV42 348 aaKnown RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 ERI1Q8IV48 349 aaKnown RBP1.87□□□□□ -2.11
CD47-203ENST00000398258 SLC22A9Q8IVM8 553 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PRR22Q8IZ63 422 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 SLC34A3Q8N130 599 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 UBE2J2Q8N2K1 259 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 OR4F6Q8NGB9 312 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 OR56B2PQ8NGI1 322 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 RAB3IL1Q8TBN0 382 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PYROXD1Q8WU10 500 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 RASD2Q96D21 266 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PHYHIPLQ96FC7 376 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 CMTM7Q96FZ5 175 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 ZIM3Q96PE6 472 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 NRIP2Q9BQI9 281 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 TMEM246Q9BRR3 403 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 DEFB127Q9H1M4 99 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PPA2Q9H2U2 334 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 IL26Q9NPH9 171 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 PLSCR3Q9NRY6 295 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 AIG1Q9NVV5 245 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 NMRK1Q9NWW6 199 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 ANAPC11Q9NYG5 84 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 TREM2Q9NZC2 230 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 IL17CQ9P0M4 197 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 SPATA7Q9P0W8 599 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 CLCF1Q9UBD9 225 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 CDHR2Q9BYE9 1310 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 NSG1A0A0A6YYJ2 146 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 HIP1O00291 1037 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 AGPAT2O15120 278 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 EMC8O43402 210 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 FAM189A1O60320 539 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 OR7A10O76100 309 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 IGHV2-5P01817 119 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 MMP1P03956 469 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 HPNP05981 417 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CT62P0C5K7 136 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 UQCRFS1P1P0C7P4 283 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CHTF8P0CG12 524 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 ZNF43P17038 809 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 NPBWR2P48146 333 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 TFPI2P48307 235 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 GPM6AP51674 278 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 WNT4P56705 351 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 TAS2R19P59542 299 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 PLP1P60201 277 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 SELENOTP62341 195 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 ERVK-25P63136 954 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 TGFBR3Q03167 851 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 DAZ2Q13117 558 aaKnown RBP1.86□□□□□ -2.11
CD47-203ENST00000398258 ORC2Q13416 577 aaPredicted RBP1.86□□□□□ -2.11
CD47-203ENST00000398258 ATP6AP1Q15904 470 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 VAX1Q5SQQ9 334 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CTRB2Q6GPI1 263 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 METAP1DQ6UB28 335 aaPredicted RBP1.86□□□□□ -2.11
CD47-203ENST00000398258 RNF165Q6ZSG1 346 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 UTS2BQ765I0 119 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 FAM228AQ86W67 206 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 SLC26A11Q86WA9 606 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 ECHDC2Q86YB7 292 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CCDC65Q8IXS2 484 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 LINC01555Q8NAE3 123 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 VN1R2Q8NFZ6 395 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 OR6C4Q8NGE1 309 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 OR1L6Q8NGR2 347 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 AKR7LQ8NHP1 331 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 FGF11Q92914 225 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 UCN3Q969E3 161 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.86□□□□□ -2.11
CD47-203ENST00000398258 PLEKHA8Q96JA3 519 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 FCRL1Q96LA6 429 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 IFT74Q96LB3 600 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 MBOAT4Q96T53 435 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 SH3GL1Q99961 368 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 CCDC77Q9BR77 488 aa1.86□□□□□ -2.11
CD47-203ENST00000398258 RIOK1Q9BRS2 568 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms