RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 MT-ND1P03886 318 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 HRGP04196 525 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 NQO1P15559 274 aaKnown RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 PAX7P23759 505 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 NR1H2P55055 460 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 PIN1Q13526 163 aaPredicted RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 TIMM23BQ5SRD1 257 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 FKBP9P1Q75LS8 142 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 PXKQ7Z7A4 578 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 EPHX4Q8IUS5 362 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 C1orf162Q8NEQ5 155 aaPredicted RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 BCAS4Q8TDM0 211 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 ZNF385AQ96PM9 386 aaKnown RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 CDRT15Q96T59 188 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 LINC00470Q9BZP3 86 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 C1orf21Q9H246 121 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 NANSQ9NR45 359 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 DCAF13Q9NV06 445 aaKnown RBP12.61□□□□□ -0.39
HDDC2-202ENST00000398153 B3GAT1Q9P2W7 334 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 NOX1Q9Y5S8 564 aa12.61□□□□□ -0.39
HDDC2-202ENST00000398153 MS4A18H0YCH9 400 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 PDLIM1O00151 329 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 HIST1H2ABP04908 130 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 MPGP29372 298 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 KRTAP10-9P60411 292 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 SLC25A3Q00325 362 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 LTBQ06643 244 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 PUDPQ08623 228 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 ZP4Q12836 540 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 FAPQ12884 760 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 PMS2P3Q13401 168 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
HDDC2-202ENST00000398153 ZNF74Q16587 644 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 MS4A18Q3C1V0 323 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 ANKRD34AQ69YU3 496 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 WDR88Q6ZMY6 472 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 HIST3H2AQ7L7L0 130 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 TSPYL5Q86VY4 417 aaPredicted RBP12.6□□□□□ -0.39
HDDC2-202ENST00000398153 CYP4Z1Q86W10 505 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 CDC20BQ86Y33 519 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 UEVLDQ8IX04 471 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 DEFB107AQ8IZN7 70 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
HDDC2-202ENST00000398153 C17orf78Q8N4C9 275 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 C10orf53Q8N6V4 93 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 TMEM239Q8WW34 195 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 LIPHQ8WWY8 451 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 NINJ1Q92982 152 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 HIST1H2ACQ93077 130 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 POP5Q969H6 163 aaKnown RBP12.6□□□□□ -0.39
HDDC2-202ENST00000398153 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 HSH2DQ96JZ2 352 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 MUS81Q96NY9 551 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 MOGAT1Q96PD6 335 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 ANKRD19PQ9H560 264 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
HDDC2-202ENST00000398153 DEFB108AA8MXU0 73 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 B2RBV5 119 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 PLPP3O14495 311 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 LYZL6O75951 148 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 ZNF432O94892 652 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 OR6A2O95222 327 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 THBDP07204 575 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 ASAH2BP0C7U1 165 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 EDNRAP25101 427 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 C22orf34Q6ZV56 151 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 VTCN1Q7Z7D3 282 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 OFCC1Q8IZS5 231 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 LRR1Q96L50 414 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 FNDC11Q9BVV2 318 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 GMPR2Q9P2T1 348 aaKnown RBP12.59□□□□□ -0.39
HDDC2-202ENST00000398153 EGFL7Q9UHF1 273 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 MED31Q9Y3C7 131 aa12.59□□□□□ -0.39
HDDC2-202ENST00000398153 CIB4A0PJX0 185 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 OR5H1A6NKK0 313 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 RPL36A-HNRNPH2H7BZ11 118 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 KLF4O43474 513 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 TRAF3IP2O43734 574 aaPredicted RBP12.58□□□□□ -0.4
HDDC2-202ENST00000398153 SLC43A1O75387 559 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 KRT33AO76009 404 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 CH25HO95992 272 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 NCK1P16333 377 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 ITGA2P17301 1181 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 DNAJA1P31689 397 aaKnown RBP12.58□□□□□ -0.4
HDDC2-202ENST00000398153 SH3BGRP55822 239 aaPredicted RBP12.58□□□□□ -0.4
HDDC2-202ENST00000398153 CLDN17P56750 224 aa12.58□□□□□ -0.4
HDDC2-202ENST00000398153 TRAM2Q15035 370 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms