RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 IL12BP29460 328 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 SLC16A1P53985 500 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 FXYD6P3P58550 94 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PDZK1Q5T2W1 519 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PLET1Q6UQ28 207 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 TTLL10Q6ZVT0 673 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 LIX1LQ8IVB5 337 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 SLC37A3Q8NCC5 494 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 CTPS2Q9NRF8 586 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 XKRYO14609 159 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 DKK1O94907 266 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 CNOT4O95628 575 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ZGLP1P0C6A0 271 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 HOXB1P14653 301 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ALDH3B1P43353 468 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 SMN1Q16637 294 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 EIF2S3LQ2VIR3 472 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 RTL6Q6ICC9 239 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 C3orf33Q6P1S2 294 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PAQR6Q6TCH4 344 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 TECTBQ96PL2 329 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 DCUN1D5Q9BTE7 237 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ALX4Q9H161 411 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 SEMA4GQ9NTN9 838 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 MYOTQ9UBF9 498 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 HTR2AP28223 471 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 AGFG1P52594 562 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 LINC01590Q5TEZ4 76 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 TMEM244Q5VVB8 128 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 AGAP6Q5VW22 663 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PAPD4Q6PIY7 484 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 GALNT10Q86SR1 603 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 NKAIN4Q8IVV8 208 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ATP6V1C2Q8NEY4 427 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 OR5M3Q8NGP4 307 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 AGAP4Q96P64 663 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 CNPPD1Q9BV87 410 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 RGCCQ9H4X1 137 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 ABCA1O95477 2261 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 GADD45AP24522 165 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 CPEB2Q7Z5Q1 589 aaKnown RBP5.34□□□□□ -1.55
PTPRD-206ENST00000397617 GINS4Q9BRT9 223 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 DEFB126Q9BYW3 111 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 PADI1Q9ULC6 663 aa5.34□□□□□ -1.55
PTPRD-206ENST00000397617 FTCDNL1E5RQL4 147 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 CDC42EP2O14613 210 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 UTS2O95399 124 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 NPR2P20594 1047 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 TGM1P22735 817 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 CXCR1P25024 350 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 RFX3P48380 749 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 LAIR1Q6GTX8 287 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 H3F3CQ6NXT2 135 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 NPSR1Q6W5P4 371 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 Q6ZSR3 168 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF679Q8IYX0 411 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 FRMD1Q8N878 549 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 GPR119Q8TDV5 335 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 PTP4A1Q93096 173 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 CREB3L1Q96BA8 519 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 SFXN2Q96NB2 322 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 CDX2Q99626 313 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-206ENST00000397617 SLC22A4Q9H015 551 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 SOX17Q9H6I2 414 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-206ENST00000397617 FLRT3Q9NZU0 649 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 SLC25A12O75746 678 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 CELP19835 753 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 OPRL1P41146 370 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 NSUN5P2Q63ZY6 315 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 SIX5Q8N196 739 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 WDR76Q9H967 626 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 INIPQ9NRY2 104 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 WIF1Q9Y5W5 379 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 MAU2Q9Y6X3 613 aa5.34□□□□□ -1.56
PTPRD-206ENST00000397617 A0A1B0GVT2 93 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 GSTZ1O43708 216 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SH3BGRLO75368 114 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ABHD16AO95870 558 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CYP4B1P13584 511 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CD97P48960 835 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 MAZP56270 477 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 UBE2MP61081 183 aaKnown RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SLC35A1P78382 337 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PUDPQ08623 228 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 H1FNTQ75WM6 255 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-206ENST00000397617 VRK2Q86Y07 508 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 OR4Q3Q8NH05 313 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 SRRQ9GZT4 340 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 EQTNQ9NQ60 294 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ABI3Q9P2A4 366 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 RASD1Q9Y272 281 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 PVRP15151 417 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 GFERP55789 205 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 DAB2P98082 770 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 CRMP1Q14194 572 aa5.33□□□□□ -1.56
PTPRD-206ENST00000397617 ALG10Q5BKT4 473 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms