RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TRIM25Q14258 630 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 TRAM2Q15035 370 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 CREB3L2Q70SY1 520 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 CXorf67Q86X51 503 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 ZNF295-AS1Q8N0V1 137 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 C7orf34Q96L11 122 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 HS6ST2Q96MM7 605 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 OXGR1Q96P68 337 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 FKRPQ9H9S5 495 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 NANSQ9NR45 359 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 PARPBPQ9NWS1 579 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 MRPL39Q9NYK5 338 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 MED31Q9Y3C7 131 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 FAM32AQ9Y421 112 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 SH3D21A4FU49 640 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 PIP5K1CO60331 668 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 ADAP00813 363 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 UMPSP11172 480 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 PRF1P14222 555 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 ZNF43P17038 809 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 MS4A2Q01362 244 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 C1DQ13901 141 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 MTX3Q5HYI7 312 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 LCN8Q6JVE9 175 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 Q6ZT83 130 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 AAED1Q7RTV5 226 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 SLC46A3Q7Z3Q1 461 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 DHFR2Q86XF0 187 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 EPHX4Q8IUS5 362 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 UBE2J2Q8N2K1 259 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 OR5J2Q8NH18 312 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 FAM222BQ8WU58 562 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 ASB9Q96DX5 294 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 BTBD10Q9BSF8 475 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 C20orf141Q9NUB4 165 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 ZNF229Q9UJW7 825 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 DCHS2Q6V1P9 2916 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 DIRAS1O95057 198 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 HPRP00739 348 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 RHCEP18577 417 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 PSMB1P20618 241 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 PUDPQ08623 228 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 FBXW9Q5XUX1 488 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 LRRC17Q8N6Y2 441 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 PIK3C3Q8NEB9 887 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 MCUR1Q96AQ8 359 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 SGTBQ96EQ0 304 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 NMNAT1Q9HAN9 279 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 NDRG3Q9UGV2 375 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 TESMINQ9Y4I5 508 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 ABCA12Q86UK0 2595 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 CACNA1DQ01668 2161 aa18.74■□□□□ 0.59
TSPAN4-206ENST00000397408 MS4A18H0YCH9 400 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 PLPP3O14495 311 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 TRAF3IP2O43734 574 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 OR7A10O76100 309 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 CNOT4O95628 575 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 IGF2P01344 180 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 ITGA2P17301 1181 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 CLDN17P56750 224 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 LSM11P83369 360 aaKnown RBP eCLIP18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 P2RY6Q15077 328 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 TSC22D1Q15714 1073 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 MS4A18Q3C1V0 323 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 ANKRD34AQ69YU3 496 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 NANOGNBQ7Z5D8 188 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 UEVLDQ8IX04 471 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 DACH2Q96NX9 599 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 MED18Q9BUE0 208 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 MALT1Q9UDY8 824 aa18.73■□□□□ 0.59
TSPAN4-206ENST00000397408 LOC102725191A0A1B0GVB3 256 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 TCRBV5S2A0A599 114 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 DNAJC8O75937 253 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 OR6A2O95222 327 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 STAMBPO95630 424 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 HIST1H2ABP04908 130 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 FABP3P05413 133 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 H1F0P07305 194 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 ASAH2BP0C7U1 165 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 ADORA3P0DMS8 318 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 HLA-DOBP13765 273 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 AHCYP23526 432 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 IL32P24001 234 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 SSTR2P30874 369 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 SELENOPP49908 381 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 POU3F1Q03052 451 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 ITGADQ13349 1161 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 IQCCQ4KMZ1 466 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 SFRP5Q5T4F7 317 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 NIPAL3Q6P499 406 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 ZNF730Q6ZMV8 503 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 HIST3H2AQ7L7L0 130 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 NRMQ8IXM6 262 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 ACOT11Q8WXI4 607 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 HIST1H2ACQ93077 130 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 KISS1RQ969F8 398 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 C14orf79Q96F83 325 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 WFIKKN1Q96NZ8 548 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 SEPHS2Q99611 448 aa18.72■□□□□ 0.59
TSPAN4-206ENST00000397408 PIP5K1AQ99755 562 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms