RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LINGO2Q7L985 606 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 GPAT4Q86UL3 456 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CARM1Q86X55 608 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 DDIASQ8IXT1 998 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CMIPQ8IY22 773 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 SYT14Q8NB59 555 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 MRAPQ8TCY5 172 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TWIST2Q8WVJ9 160 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 IFT81Q8WYA0 676 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RDH5Q92781 318 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TMIGD2Q96BF3 282 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ROPN1LQ96C74 230 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 LRRC58Q96CX6 371 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ZG16BQ96DA0 208 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RBM4BQ9BQ04 359 aaKnown RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 DUSP26Q9BV47 211 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 OR51I1Q9H343 314 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 PSMC3IPQ9P2W1 217 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 MID2Q9UJV3 735 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 PYCARDQ9ULZ3 195 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RNF103-CHMP3A0A140T963 221 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 A0A1W2PPM1 405 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 CLDN24A6NM45 220 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 TMEM229AB2RXF0 380 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 AP3D1O14617 1153 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 WNT9BO14905 357 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 PIP5K1BO14986 540 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 RIPK2O43353 540 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 UPK3AO75631 287 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 MPZL1O95297 269 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 HPXP02790 462 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 GSNP06396 782 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 OR12D1P0DN82 309 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 NR4A1P22736 598 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 COL8A2P25067 703 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 CRHR1P34998 444 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 CCT5P48643 541 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 MYBPC1Q00872 1141 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 FUT5Q11128 374 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 OR7A5Q15622 319 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 FAM189A2Q15884 450 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 DCAF12L2Q5VW00 463 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 SPATC1Q76KD6 591 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 TRMT10CQ7L0Y3 403 aaKnown RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 DOK3Q7L591 496 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 CCDC36Q8IYA8 594 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 KRTCAP2Q8N6L1 136 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 KIR3DL3Q8N743 410 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 XAGE5Q8WWM1 108 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 CNOT9Q92600 299 aaKnown RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 GATA5Q9BWX5 397 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 NOX3Q9HBY0 568 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF275Q9NSD4 429 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-203ENST00000397378 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
NEDD9-203ENST00000397378 J3QLI3 93 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RNASET2O00584 256 aaKnown RBP8.06□□□□□ -1.12
NEDD9-203ENST00000397378 TRIM13O60858 407 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 PEX11AO75192 247 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF432O94892 652 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 TSPAN15O95858 294 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 ROR2Q01974 943 aaKnown RBP8.06□□□□□ -1.12
NEDD9-203ENST00000397378 NPRL3Q12980 569 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 GSTA3Q16772 222 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 MSMPQ1L6U9 139 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 BEAN1Q3B7T3 259 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 C6orf136Q5SQH8 315 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 IL23RQ5VWK5 629 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 NIPAL3Q6P499 406 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RHOUQ7L0Q8 258 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 EPHX4Q8IUS5 362 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 C10orf107Q8IVU9 208 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 CLECL1Q8IZS7 167 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 CLEC4FQ8N1N0 589 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RIBC1Q8N443 379 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-203ENST00000397378 CCDC63Q8NA47 563 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RAB8BQ92930 207 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 DVL3Q92997 716 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-203ENST00000397378 YIPF5Q969M3 257 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 CITED1Q99966 193 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 C1orf50Q9BV19 199 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF416Q9BWM5 594 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 MRPL37Q9BZE1 423 aaKnown RBP8.06□□□□□ -1.12
NEDD9-203ENST00000397378 C7orf69Q9H7B7 122 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 CRLF2Q9HC73 371 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 ADPRHL2Q9NX46 363 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 TBK1Q9UHD2 729 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 KLHL21Q9UJP4 597 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RCE1Q9Y256 329 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 RASD1Q9Y272 281 aa8.06□□□□□ -1.12
NEDD9-203ENST00000397378 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms