RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 OR11A1Q9GZK7 315 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 TBC1D23Q9NUY8 699 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
SEC13-209ENST00000397117 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.5
SEC13-209ENST00000397117 TRAV27A0A087WT01 109 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZC3H12DA2A288 527 aaKnown RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 H3BML4 177 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 OR2T1O43869 369 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 MT-ATP6P00846 226 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TP53P04637 393 aaPredicted RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 RFPL3SP0C7P2 107 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 PEPDP12955 493 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ELK4P28324 431 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 RFC3P40938 356 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 CDC42P60953 191 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 IL5RAQ01344 420 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZBED5Q49AG3 693 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 KRTCAP3Q53RY4 240 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 FAM69AQ5T7M9 428 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZNF691Q5VV52 312 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SLC27A4Q6P1M0 643 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 USP51Q70EK9 711 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 OR51A7Q8NH64 312 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SLC25A36Q96CQ1 311 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 GPR137Q96N19 417 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 MYCBPQ99417 103 aaPredicted RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 PITX2Q99697 317 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TSSK6Q9BXA6 273 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TTTY12Q9BZ98 90 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 UBQLN3Q9H347 655 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TMEM185BQ9H7F4 350 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 FKRPQ9H9S5 495 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 IMPAD1Q9NX62 359 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 IL20Q9NYY1 176 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 UBAP1Q9NZ09 502 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZNF229Q9UJW7 825 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 MEMO1Q9Y316 297 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 OR2M5A3KFT3 312 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 LRRN3E7EW58 273 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 NPIPB7O75200 414 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 IL11P20809 199 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 GTF2E2P29084 291 aaKnown RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 GGT2P36268 569 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 GINS1Q14691 196 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SYT14P1Q58G82 188 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 CLEC12AQ5QGZ9 265 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TMEM236Q5W0B7 351 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SLC46A3Q7Z3Q1 461 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 YRDCQ86U90 279 aaKnown RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 SLC22A16Q86VW1 577 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 DEPDC4Q8N2C3 294 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 FAM98AQ8NCA5 519 aaKnown RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 FAM81AQ8TBF8 368 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 SAMD8Q96LT4 415 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 MOGAT1Q96PD6 335 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 TNFRSF13CQ96RJ3 184 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 POTEKPQ9BYX7 375 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 PLA2G12AQ9BZM1 189 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 NDEL1Q9GZM8 345 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 OR52D1Q9H346 318 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
SEC13-209ENST00000397117 SIGLEC7Q9Y286 467 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 HSPE1-MOB4S4R3N1 261 aa11.89□□□□□ -0.51
SEC13-209ENST00000397117 FAM166BA8MTA8 275 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 ACOT7O00154 380 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 EFNA2O43921 213 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 PTP4A3O75365 173 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 BGLAPP02818 100 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 IDUAP35475 653 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 GIPRP48546 466 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 CLK1P49759 484 aaKnown RBP11.88□□□□□ -0.51
SEC13-209ENST00000397117 PRPS1P60891 318 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
SEC13-209ENST00000397117 BLMHQ13867 455 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 MFSD13AQ14CX5 517 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 TMEM44Q2T9K0 475 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 ANKDD1AQ495B1 522 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 SLX4IPQ5VYV7 408 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 NANOGNBQ7Z5D8 188 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 SLC43A2Q8N370 569 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 IQCF1Q8N6M8 205 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 OR6S1Q8NH40 331 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 LIPHQ8WWY8 451 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 SFXN2Q96NB2 322 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 PTDSS2Q9BVG9 487 aa11.88□□□□□ -0.51
SEC13-209ENST00000397117 IFT27Q9BW83 186 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms