RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PRODHO43272 600 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ENTPD6O75354 484 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 OR6A2O95222 327 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 PPP1R3DO95685 299 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 SMIM18P0DKX4 95 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 GTF2E2P29084 291 aaKnown RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 SDHAP31040 664 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 RPL4P36578 427 aaKnown RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 AGFG1P52594 562 aaKnown RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 PUDPQ08623 228 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ITGADQ13349 1161 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 SLC10A1Q14973 349 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 OR7A5Q15622 319 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 MS4A18Q3C1V0 323 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 BORAQ6PGQ7 559 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ZNF773Q6PK81 442 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 PAQR6Q6TCH4 344 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 NHLRC1Q6VVB1 395 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ESPNLQ6ZVH7 1005 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 PXKQ7Z7A4 578 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 FAM98AQ8NCA5 519 aaKnown RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ANKK1Q8NFD2 765 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 OR5M1Q8NGP8 315 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ZNF417Q8TAU3 575 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 SFXN2Q96NB2 322 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ZNF582Q96NG8 517 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 SIGLEC11Q96RL6 698 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ZNF587Q96SQ5 575 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 KATNB1Q9BVA0 655 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 TXNIPQ9H3M7 391 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 ZDHHC11Q9H8X9 412 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 INIPQ9NRY2 104 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 AASSQ9UDR5 926 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.22□□□□□ -0.45
MCF2L-209ENST00000397036 NCOR2Q9Y618 2525 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
MCF2L-209ENST00000397036 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 SULT2B1O00204 365 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 XPNPEP2O43895 674 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 TRAPPC6AO75865 159 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 VAMP5O95183 116 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 ADORA3P0DMS8 318 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 ZNF3P17036 446 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 NOS3P29474 1203 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 DIO1P49895 249 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 P2RY4P51582 365 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 RAC3P60763 192 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 PPIAP62937 165 aaKnown RBP12.21□□□□□ -0.45
MCF2L-209ENST00000397036 PLGLB1Q02325 96 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 TOMM20Q15388 145 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.45
MCF2L-209ENST00000397036 RPUSD3Q6P087 351 aaKnown RBP12.21□□□□□ -0.45
MCF2L-209ENST00000397036 Q6ZS92 163 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.45
MCF2L-209ENST00000397036 GID4Q8IVV7 300 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 ATP6V1C2Q8NEY4 427 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 GGHQ92820 318 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 PTP4A1Q93096 173 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 ADGRG7Q96K78 797 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 OR5B2Q96R09 309 aa12.21□□□□□ -0.45
MCF2L-209ENST00000397036 IRGMA1A4Y4 181 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 AQP7P3A6NL99 342 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 AHCYL1O43865 530 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 FAM20BO75063 409 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 CLPTM1O96005 669 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ACTL6AO96019 429 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ITGB2P05107 769 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 PAICSP22234 425 aaKnown RBP12.21□□□□□ -0.46
MCF2L-209ENST00000397036 SHC1P29353 583 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 OR2B6P58173 313 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ERVK-25P63136 954 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 WIPI1Q5MNZ9 446 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ARMC4Q5T2S8 1044 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 RNLSQ5VYX0 342 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 FAM205BPQ63HN1 556 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 PRSS48Q7RTY5 328 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ADCK1Q86TW2 530 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 CPOQ8IVL8 374 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ARIH2OSQ8N7S6 290 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ZNF540Q8NDQ6 660 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 MYDGFQ969H8 173 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-209ENST00000397036 NMNAT2Q9BZQ4 307 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 HINT3Q9NQE9 182 aaKnown RBP12.21□□□□□ -0.46
MCF2L-209ENST00000397036 HAO2Q9NYQ3 351 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 H2AFY2Q9P0M6 372 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-209ENST00000397036 GRHPRQ9UBQ7 328 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 RASD1Q9Y272 281 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 NOX1Q9Y5S8 564 aa12.21□□□□□ -0.46
MCF2L-209ENST00000397036 ALPK2Q86TB3 2170 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 MED12Q93074 2177 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 A0A0J9YW62 118 aa12.2□□□□□ -0.46
MCF2L-209ENST00000397036 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms