RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ABCA7Q8IZY2 2146 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 CEP250Q9BV73 2442 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 RFPL4AA6NLU0 287 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 RFPL4AL1F8VTS6 287 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 WNT1P04628 370 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 FGF2P09038 288 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 GIPP09681 153 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 SLC6A1P30531 599 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ERVPABLB-1P60509 514 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SERINC3Q13530 473 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 UBXN2BQ14CS0 331 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 GSG1Q2KHT4 349 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TCTN1Q2MV58 587 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PLK5Q496M5 336 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SLC16A9Q7RTY1 509 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 OR5M8Q8NGP6 311 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 BRIX1Q8TDN6 353 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PTCHD1Q96NR3 888 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 WNT5BQ9H1J7 359 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 MAGIXQ9H6Y5 334 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 HEBP1Q9NRV9 189 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 CA10Q9NS85 328 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 MAN2C1Q9NTJ4 1040 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 KLK11Q9UBX7 282 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 OR14J1Q9UGF5 321 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SLC25A13Q9UJS0 675 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 EXOGQ9Y2C4 368 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 A0A1B0GWJ7 208 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PPM1DO15297 605 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SEC14L5O43304 696 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ZNF208O43345 1280 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 C6orf47O95873 294 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 GASTP01350 101 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 AMY2AP04746 511 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ADRB3P13945 408 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 RAB5AP20339 215 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 NSG1P42857 185 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 RPS26P62854 115 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 EIF5AP63241 154 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 TAP2Q03519 686 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TLE4Q04727 773 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 YOD1Q5VVQ6 348 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 SECTM1Q8WVN6 248 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PDXPQ96GD0 296 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PACRGQ96M98 296 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 TRIB3Q96RU7 358 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ABHD1Q96SE0 405 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 DUSP26Q9BV47 211 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PTGES2Q9H7Z7 377 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 IKZF2Q9UKS7 526 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ZDHHC8Q9ULC8 765 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 GAB2Q9UQC2 676 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 A0A0D9SG52 128 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 UMAD1C9J7I0 102 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ANXA4P09525 319 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 TYMPP19971 482 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 STC1P52823 247 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ZC3H14Q6PJT7 736 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 RSPO2Q6UXX9 243 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 DLEU7Q6UYE1 221 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TMPRSS7Q7RTY8 843 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 CPOQ8IVL8 374 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 FAM219AQ8IW50 185 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SUMF2Q8NBJ7 301 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SMAP2Q8WU79 429 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 SNX22Q96L94 193 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 CDCA3Q99618 268 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 MRI1Q9BV20 369 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 LHX9Q9NQ69 397 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TRIM36Q9NQ86 728 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 MRPL17Q9NRX2 175 aaKnown RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 UQCC1Q9NVA1 299 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TMEM184CQ9NVA4 438 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PPP1R14DQ9NXH3 145 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 ZNF226Q9NYT6 803 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 PLEKHB1Q9UF11 243 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 SRPK3Q9UPE1 567 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
NDE1-202ENST00000396355 MED12Q93074 2177 aa7.8□□□□□ -1.16
NDE1-202ENST00000396355 SPTBP11277 2137 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 A8MXK9 166 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 MASP2O00187 686 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 RAB29O14966 203 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 NME2P1O60361 137 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 DFFBO76075 338 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PDGFBP01127 241 aaPredicted RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 IGLV3-27P01718 113 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 RPLP1P05386 114 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 GP1BAP07359 652 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PGAM2P15259 253 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 TNFRSF9Q07011 255 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 NDUFA9Q16795 377 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 METAP1DQ6UB28 335 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms