RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SLC16A13Q7RTY0 426 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 WDR53Q7Z5U6 358 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 PLXDC1Q8IUK5 500 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ACOT11Q8WXI4 607 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 ADIPOR1Q96A54 375 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ART5Q96L15 291 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 DDOQ99489 341 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ZNF649Q9BS31 505 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 G6PC3Q9BUM1 346 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TSSK6Q9BXA6 273 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ZNF275Q9NSD4 429 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 NUDT15Q9NV35 164 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 PISDQ9UG56 409 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 PURGQ9UJV8 347 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 SRPK3Q9UPE1 567 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GSTK1Q9Y2Q3 226 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GPR55Q9Y2T6 319 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 KIAA0100Q14667 2235 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 PDE4DIPQ5VU43 2346 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TEX13CA0A0J9YWL9 993 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TMEM129A0AVI4 362 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SHISA3A0PJX4 238 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SULT1B1O43704 296 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 PRAMEF2O60811 474 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 STX11O75558 287 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SNAPC5O75971 98 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 RAB36O95755 333 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TCRBP04435 133 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 HMGN2P05204 90 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 AK4P27144 223 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 WASP42768 502 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 CRATP43155 626 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 CXCL12P48061 93 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 RFX3P48380 749 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 WNT4P56705 351 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ZFP36L1Q07352 338 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 ST3GAL3Q11203 375 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ST3GAL2Q16842 350 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SLC36A2Q495M3 483 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 C18orf63Q68DL7 685 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 RHBDD2Q6NTF9 364 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ASB18Q6ZVZ8 466 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 LAPTM4BQ86VI4 370 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 COMTD1Q86VU5 262 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 MMP21Q8N119 569 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 NKAIN3Q8N8D7 197 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 AQP11Q8NBQ7 271 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 OR52I1Q8NGK6 324 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 OR8J1Q8NGP2 316 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ADAMTS14Q8WXS8 1223 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 EDAQ92838 391 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TMEM203Q969S6 136 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GTPBP3Q969Y2 492 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 SFXN2Q96NB2 322 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SLC46A1Q96NT5 459 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 IL4I1Q96RQ9 567 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 ABCG5Q9H222 651 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 MKKSQ9NPJ1 570 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 CYSLTR2Q9NS75 346 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 DNAJC27Q9NZQ0 273 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 EMC3Q9P0I2 261 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GRHPRQ9UBQ7 328 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 PRODH2Q9UF12 536 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SLC35A3Q9Y2D2 325 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 LOC105369274A0A096LPK9 316 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 A0A0B4J2E0 115 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 A0A1B0GX12 115 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 PLSCR5A0PG75 271 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 J3KTA2 159 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 SGCEO43556 437 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 GADD45GO95257 159 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 CPSF4O95639 269 aaKnown RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 LY86O95711 162 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 CD37P11049 281 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 ELK1P19419 428 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 TNFRSF1BP20333 461 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 TBXA2RP21731 343 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 ACP1P24666 158 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 PPICP45877 212 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 MEOX2P50222 304 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 VSX2P58304 361 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 BTN3A2P78410 334 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 PSG6Q00889 435 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 CFHR1Q03591 330 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 NTRK2Q16620 822 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 RNASE12Q5GAN4 147 aaKnown RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 PLA2G2CQ5R387 149 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 B3GNTL1Q67FW5 361 aaPredicted RBP4.9□□□□□ -1.62
VPS41-203ENST00000395969 SLC27A4Q6P1M0 643 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 TMEM71Q6P5X7 295 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 FAM111BQ6SJ93 734 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 SLC22A25Q6T423 547 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 TMEM205Q6UW68 189 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 NLRC3Q7RTR2 1065 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 KRT74Q7RTS7 529 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 MISPQ8IVT2 679 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 OR4N4Q8N0Y3 316 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 FTMTQ8N4E7 242 aa4.9□□□□□ -1.62
VPS41-203ENST00000395969 ADPRHL1Q8NDY3 354 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms