RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 IQCGQ9H095 443 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 NSRP1Q9H0G5 558 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 PRDM13Q9H4Q3 707 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 MMP26Q9NRE1 261 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 C1RLQ9NZP8 487 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 TBK1Q9UHD2 729 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 DCDC2Q9UHG0 476 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 LEF1Q9UJU2 399 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 POLR3HQ9Y535 204 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF587BE7ETH6 402 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 RPL36A-HNRNPH2H7BZ11 118 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 UPK3AO75631 287 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 CLPXO76031 633 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 NAT2P11245 290 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 KRT4P19013 534 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 CRYBB2P43320 205 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 SELENOPP49908 381 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 ATP4BP51164 291 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 P2RY4P51582 365 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 GNGT1P63211 74 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 PLAURQ03405 335 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 PDE7AQ13946 482 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 KIAA0040Q15053 153 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 MMEL1Q495T6 779 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 ARMCX4Q5H9R4 360 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 GPRIN3Q6ZVF9 776 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 GRINAQ7Z429 371 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 KCNA7Q96RP8 456 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 GPATCH2Q9NW75 528 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 B3GNT2Q9NY97 397 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 TIMM22Q9Y584 194 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 NUP214P35658 2090 aaPredicted RBP11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 DNAH7Q8WXX0 4024 aa11.61□□□□□ -0.55
VCPKMT-201ENST00000395859 DSPPQ9NZW4 1301 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 GMNCA6NCL1 334 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 CDC14BO60729 498 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 FAM107AO95990 144 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 BCKDHAP12694 445 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 CRHR1P34998 444 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 PGM1P36871 562 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 LCN2P80188 198 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF154Q13106 437 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 NOXRED1Q6NXP6 359 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 MDP1Q86V88 176 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF614Q8N883 585 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 ZFP28Q8NHY6 868 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 DYDC1Q8WWB3 177 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 SDF2Q99470 211 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 LYSTQ99698 3801 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 LINC00470Q9BZP3 86 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 KCNK9Q9NPC2 374 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 PURGQ9UJV8 347 aaKnown RBP11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 CCL27Q9Y4X3 112 aa11.6□□□□□ -0.55
VCPKMT-201ENST00000395859 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 COPEO14579 308 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 BIRC5O15392 142 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 GLRA3O75311 464 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF12P17014 697 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TAC1P20366 129 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 HMOX2P30519 316 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 FOXA1P55317 472 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 LOXL3P58215 753 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 PROK1P58294 105 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF678Q5SXM1 525 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TRIM46Q7Z4K8 759 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TREML1Q86YW5 311 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TMEM99Q8N816 258 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 PSMA8Q8TAA3 256 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 ACTRT3Q9BYD9 372 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 SERHL2Q9H4I8 314 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 NKIRAS2Q9NYR9 191 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 AUP1Q9Y679 476 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 CACNG2Q9Y698 323 aa11.59□□□□□ -0.55
VCPKMT-201ENST00000395859 TMEM72A0PK05 275 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 C5orf63A6NC05 138 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 C17orf100A8MU93 164 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ZNF208O43345 1280 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 UGT2B17O75795 530 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 SEC14L2O76054 403 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 PLATP00750 562 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 CSTAP01040 98 aa11.58□□□□□ -0.56
VCPKMT-201ENST00000395859 ENO1P06733 434 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms