RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 COX15Q7KZN9 410 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 PRSS42Q7Z5A4 293 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SLITRK4Q8IW52 837 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF433Q8N7K0 673 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 CELF2-AS1Q8N7Q2 184 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ABHD4Q8TB40 342 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 THEM6Q8WUY1 208 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ADAD1Q96M93 576 aaKnown RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 PCNX3Q9H6A9 2034 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 BAIAP2Q9UQB8 552 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 A0A087WV48 116 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 A0A0B4J203 849 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 SNPHO15079 494 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 RGS9O75916 674 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-203ENST00000394269 IMPDH2P12268 514 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 INPP1P49441 399 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 EIF2B2P49770 351 aaKnown RBP10.12□□□□□ -0.79
TCOF1-203ENST00000394269 COL28A1Q2UY09 1125 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 SLC6A19Q695T7 634 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 VASNQ6EMK4 673 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 GDPD3Q7L5L3 318 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 OR6N2Q8NGY6 317 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 AP3S1Q92572 193 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 MR1Q95460 341 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 NEDD4LQ96PU5 975 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 MIXL1Q9H2W2 232 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 A3GALT2U3KPV4 340 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 SVILO95425 2214 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 A0A075B6Q4 140 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 A0A1B0GTH9 108 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 A0A1W2PQ09 198 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 MEN1O00255 615 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 SUSD5O60279 629 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 CD14P08571 375 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 PGCP20142 388 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 CD97P48960 835 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 CLDN6P56747 220 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 P2RY14Q15391 338 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 PM20D2Q8IYS1 436 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 SDHCQ99643 169 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-203ENST00000394269 KCNN2Q9H2S1 579 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 NRIP3Q9NQ35 241 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 ICAM5Q9UMF0 924 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 IGF2RP11717 2491 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 TMEM131Q92545 1883 aa10.12□□□□□ -0.79
TCOF1-203ENST00000394269 TECTAO75443 2155 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 XKRYO14609 159 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 OR8G3PP0DMU2 310 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 PRKCAP17252 672 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 SOX2P48431 317 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 GBX2P52951 348 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-203ENST00000394269 MELKQ14680 651 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 DPY19L4Q7Z388 723 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ANKRD37Q7Z713 158 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 C1orf210Q8IVY1 113 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 THAP4Q8WY91 577 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 CHRNA10Q9GZZ6 450 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 FER1L5A0AVI2 2057 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 TMED7-TICAM2A0A0A6YYA0 188 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 OR2J2O76002 312 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF28P17035 718 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 DCAF7P61962 342 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 CBX3Q13185 183 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 BTBD16Q32M84 506 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 GLYR1Q49A26 553 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-203ENST00000394269 PRAMEF20Q5VT98 475 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 MTFR2Q6P444 385 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ARSKQ6UWY0 536 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 SLC35D2Q76EJ3 337 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 KMT5CQ86Y97 462 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 OR8K3Q8NH51 312 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 OR14A2Q96R54 314 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 LAT2Q9GZY6 243 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 MMP28Q9H239 520 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 TBCCD1Q9NVR7 557 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 TAS2R10Q9NYW0 307 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 TMED7Q9Y3B3 224 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 AK6Q9Y3D8 172 aaKnown RBP10.11□□□□□ -0.79
TCOF1-203ENST00000394269 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 G3V3Y1 287 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 J3QRE1 110 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 DOK2O60496 412 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 IL7P13232 177 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 SLC2A5P22732 501 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 MYL9P24844 172 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 GALNSP34059 522 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 TPTEP56180 551 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 SNTA1Q13424 505 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 KRR1Q13601 381 aaKnown RBP10.11□□□□□ -0.79
TCOF1-203ENST00000394269 CBFBQ13951 182 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF79Q15937 498 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ZSWIM7Q19AV6 140 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 ARIH2OSQ8N7S6 290 aa10.11□□□□□ -0.79
TCOF1-203ENST00000394269 YIPF7Q8N8F6 280 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms