RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MTHFD2P13995 350 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 KCNE1P15382 129 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SULT1A1P50225 295 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 PRKAG1P54619 331 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ACTBP60709 375 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ACTG1P63261 375 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 PITX1P78337 314 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 VAMP3Q15836 100 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 UBE2NLQ5JXB2 153 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 MBOAT1Q6ZNC8 495 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 FAM220AQ7Z4H9 259 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CFAP52Q8N1V2 620 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 EID2Q8N6I1 236 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OR2AP1Q8NGE2 309 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OR13C2Q8NGS9 318 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SYNPRQ8TBG9 265 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SECTM1Q8WVN6 248 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 HLA-CQ95604 372 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OTUB2Q96DC9 234 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CMTM7Q96FZ5 175 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SIGLEC11Q96RL6 698 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 NEU1Q99519 415 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CPEB1Q9BZB8 566 aaKnown RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 LHX9Q9NQ69 397 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SLCO1B1Q9Y6L6 691 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CEP290O15078 2479 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 A0A1W2PPE3 182 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 FAM72CH0Y354 149 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 DPM1O60762 260 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 MOSPD3O75425 235 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 PMS2P2O95744 297 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 BCHEP06276 602 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 EPHX1P07099 455 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 LPOP22079 712 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ITPKAP23677 461 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 EPHB3P54753 998 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 RASGEF1BQ0VAM2 473 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ARSJQ5FYB0 599 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 FAM72AQ5TYM5 149 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 FAM72DQ6L9T8 149 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 REEP3Q6NUK4 255 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 FAM72BQ86X60 149 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OR51S1Q8NGJ8 323 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OR6X1Q8NH79 312 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 SMPDL3BQ92485 455 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM18Q96B42 140 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ORAI1Q96D31 301 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ZPBPQ9BS86 351 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 LAT2Q9GZY6 243 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM27Q9HBJ8 222 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TREX1Q9NSU2 369 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 GDE1Q9NZC3 331 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 KLK11Q9UBX7 282 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CDK5RAP2Q96SN8 1893 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 COLCA2A8K830 154 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 KDELR3O43731 214 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TBX18O95935 607 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 RNF144AP50876 292 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 DVL1P1P54792 670 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 IL13RA1P78552 427 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 INSL4Q14641 139 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 C18orf21Q32NC0 220 aaPredicted RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM207Q6UWW9 146 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TMPRSS11BQ86T26 416 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 GLB1L2Q8IW92 636 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 OR4K1Q8NGD4 311 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 PPP1R1CQ8WVI7 109 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 CDC6Q99741 560 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 ARHGAP9Q9BRR9 750 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 TEX101Q9BY14 249 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 PARP12Q9H0J9 701 aaKnown RBP7.07□□□□□ -1.28
VTI1A-201ENST00000393077 MED17Q9NVC6 651 aa7.07□□□□□ -1.28
VTI1A-201ENST00000393077 LOC102724200A0A096LPH7 203 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TRBV4-1A0A0J9YWV2 114 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 RIIAD1A6NNX1 92 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PIRO00625 290 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 FOLR2P14207 255 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 AKR1C4P17516 323 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 DCTDP32321 178 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PRSS3P35030 304 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 LSSP48449 732 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 EBPQ15125 230 aaKnown RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM41BQ5BJD5 291 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 PRRT3Q5FWE3 981 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 C11orf87Q6NUJ2 197 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 Q6ZRG5 221 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TMPRSS7Q7RTY8 843 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 LRRTM4Q86VH4 590 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 LRRC56Q8IYG6 542 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-201ENST00000393077 ASB13Q8WXK3 278 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 AMDHD1Q96NU7 426 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TECTBQ96PL2 329 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TXN2Q99757 166 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 AIF1LQ9BQI0 150 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 TMEM208Q9BTX3 173 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SLC39A8Q9C0K1 460 aa7.06□□□□□ -1.28
VTI1A-201ENST00000393077 SERINC1Q9NRX5 453 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms