RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZFAND5O76080 213 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 TK1P04183 234 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 TRAPPC2P0DI81 140 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 TRAPPC2BP0DI82 140 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 APLNRP35414 380 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 NUDT1P36639 197 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 PPT1P50897 306 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 CCR6P51684 374 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 RPS18P62269 152 aaKnown RBP12.16□□□□□ -0.46
LCA5-202ENST00000392959 CTU2Q2VPK5 515 aaKnown RBP12.16□□□□□ -0.46
LCA5-202ENST00000392959 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ABHD17CQ6PCB6 329 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 OLIG3Q7RTU3 272 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ZNF511Q8NB15 262 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 NUDT22Q9BRQ3 303 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 QPCTLQ9NXS2 382 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 A0A1B0GTW7 788 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 CD14P08571 375 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 S100A11P31949 105 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
LCA5-202ENST00000392959 BBS1Q8NFJ9 593 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 SLCO4A1Q96BD0 722 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 WDR76Q9H967 626 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ADAM23O75077 832 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 SYT14P1Q58G82 188 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 MFSD12Q6NUT3 480 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 FAM57BQ71RH2 274 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 PRICKLE2Q7Z3G6 844 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 SLC51BQ86UW2 128 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 RAB3CQ96E17 227 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 DNMT3BQ9UBC3 853 aaKnown RBP12.16□□□□□ -0.46
LCA5-202ENST00000392959 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 OR6C65A6NJZ3 312 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ITGB2P05107 769 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 IL32P24001 234 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 CSNK1G2P78368 415 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 SF3B4Q15427 424 aaKnown RBP eCLIP12.16□□□□□ -0.46
LCA5-202ENST00000392959 C11orf91Q3C1V1 193 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 C3orf49Q96BT1 292 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 NKX2-4Q9H2Z4 354 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ZNF286AQ9HBT8 521 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 CUTCQ9NTM9 273 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 ACER3Q9NUN7 267 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 CA5BQ9Y2D0 317 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 OR7C1O76099 320 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 STK17BO94768 372 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 BMP1P13497 986 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 ITGB8P26012 769 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.46
LCA5-202ENST00000392959 TNFRSF4P43489 277 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 DPY19L2P2Q6ZN68 376 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 OR51D1Q8NGF3 324 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 LMAN1LQ9HAT1 526 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 MCTS1Q9ULC4 181 aaKnown RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 PTRH2Q9Y3E5 179 aaKnown RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 ETV7Q9Y603 341 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 TOPAZ1Q8N9V7 1692 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 A8MXE2 369 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PIPP12273 146 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 SOWAHCQ53LP3 525 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 YIF1BQ5BJH7 314 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PIGCQ92535 297 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 GIMAP5Q96F15 307 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PDXPQ96GD0 296 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 SLCO5A1Q9H2Y9 848 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 PLPP1O14494 284 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 PAPLNO95428 1278 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 SERPINA7P05543 415 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 FOLR3P41439 243 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 BTG1P62324 171 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 MAT1AQ00266 395 aaKnown RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 ZP2Q05996 745 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 ALKBH1Q13686 389 aaKnown RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 CD276Q5ZPR3 534 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 ESPNLQ6ZVH7 1005 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 RBM45Q8IUH3 476 aaKnown RBP12.15□□□□□ -0.46
LCA5-202ENST00000392959 FRMD1Q8N878 549 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 OR9K2Q8NGE7 335 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 SDSLQ96GA7 329 aa12.15□□□□□ -0.46
LCA5-202ENST00000392959 MBOAT4Q96T53 435 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms