RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 A0A1B0GWA3 101 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 M0R082 166 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 CELA3BP08861 270 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ARAFP10398 606 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 AQP1P29972 269 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 APOBEC3AP31941 199 aaPredicted RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ROR2Q01974 943 aaKnown RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ZSWIM7Q19AV6 140 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 TMEM249Q2WGJ8 235 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 LRIF1Q5T3J3 769 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 GCNT6Q5T4J0 391 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF417Q8TAU3 575 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 SLC38A2Q96QD8 506 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF587Q96SQ5 575 aaPredicted RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 PIF1Q9H611 641 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 RPS6KB2Q9UBS0 482 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 SVEP1Q4LDE5 3571 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF503-AS2A6NEH8 195 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 TLX2O43763 284 aaPredicted RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 SEC14L2O76054 403 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 VAMP5O95183 116 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 GTF2E2P29084 291 aaKnown RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 MRPL19P49406 292 aaKnown RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 AQP5P55064 265 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 CDK6Q00534 326 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 SWI5Q1ZZU3 235 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 TTMPQ5BVD1 217 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 AGBL2Q5U5Z8 902 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 VHLLQ6RSH7 139 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 ABHD12BQ7Z5M8 362 aaPredicted RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 LRRC8CQ8TDW0 803 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 FAM168AQ92567 244 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 THOC1Q96FV9 657 aaKnown RBP14.44□□□□□ -0.1
PTPRK-208ENST00000392449 SORCS2Q96PQ0 1159 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 RAD21L1Q9H4I0 556 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 BOLA1Q9Y3E2 137 aa14.44□□□□□ -0.1
PTPRK-208ENST00000392449 MXRA5Q9NR99 2828 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 TRBV5-3A0A0A0MS03 114 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 A8MV72 311 aaPredicted RBP14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF432O94892 652 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 CECR9P0C854 216 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ETS2P15036 469 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF43P17038 809 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 GRPRP30550 384 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 CALCRP30988 508 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 PRKAR1BP31321 381 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 EFNA4P52798 201 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 UBE2NP61088 152 aaKnown RBP14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ARF1P84077 181 aaKnown RBP14.43□□□□□ -0.1
PTPRK-208ENST00000392449 IL1RL1Q01638 556 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 AGKQ53H12 422 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ALG10BQ5I7T1 473 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 PHYHD1Q5SRE7 291 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 C6orf52Q5T4I8 152 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 HMBOX1Q6NT76 420 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 C6orf89Q6UWU4 347 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 CXXC5Q7LFL8 322 aaKnown RBP14.43□□□□□ -0.1
PTPRK-208ENST00000392449 WDFY1Q8IWB7 410 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 ANKS4BQ8N8V4 417 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 RNF217Q8TC41 542 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 C10orf105Q8TEF2 133 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 BOD1Q96IK1 185 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 TNFRSF13CQ96RJ3 184 aa14.43□□□□□ -0.1
PTPRK-208ENST00000392449 TPST2O60704 377 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 HPRP00739 348 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 HLA-DOBP13765 273 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 NAAAQ02083 359 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 CHRNB3Q05901 458 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 SCARB2Q14108 478 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 ADRM1Q16186 407 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 CARD17Q5XLA6 110 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 REEP3Q6NUK4 255 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 ANKRD16Q6P6B7 361 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 DHRS4L2Q6PKH6 230 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 HIPK1Q86Z02 1210 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 LSMEM1Q8N8F7 131 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 SLC35B4Q969S0 331 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 OXGR1Q96P68 337 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 LINC00470Q9BZP3 86 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 CA10Q9NS85 328 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 KLHL14Q9P2G3 628 aa14.42□□□□□ -0.1
PTPRK-208ENST00000392449 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.42□□□□□ -0.1
PTPRK-208ENST00000392449 ARPC4-TTLL3A0A0A6YYG9 625 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 LRRN3E7EW58 273 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 TRAF3IP2O43734 574 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-208ENST00000392449 TGDSO95455 350 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 DSCR9P59020 149 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 LOXL1Q08397 574 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-208ENST00000392449 C1DQ13901 141 aaKnown RBP14.41□□□□□ -0.1
PTPRK-208ENST00000392449 ADIPOQQ15848 244 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 CEACAM16Q2WEN9 425 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 FAM69AQ5T7M9 428 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 OR2M2Q96R28 347 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 KCNS3Q9BQ31 491 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 CPPED1Q9BRF8 314 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-208ENST00000392449 CCDC28BQ9BUN5 200 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 EMC6Q9BV81 110 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 KATNB1Q9BVA0 655 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 GPR35Q9HC97 309 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 OBP2BQ9NPH6 170 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms