RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 EFNA3P52797 238 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 IL11RAQ14626 422 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 PPA1Q15181 289 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 DHRS4L2Q6PKH6 230 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 OR2T27Q8NH04 317 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 GRPEL2Q8TAA5 225 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 FAM117AQ9C073 453 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 AMBRA1Q9C0C7 1298 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 WDR76Q9H967 626 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 ALPLP05186 524 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 ILKQ13418 452 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 CRMP1Q14194 572 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 P2RY14Q15391 338 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 TRIP6Q15654 476 aaKnown RBP9.46□□□□□ -0.89
PKP4-201ENST00000389757 LRRC37A5PQ49AS3 106 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 PTRH1Q86Y79 214 aaKnown RBP9.46□□□□□ -0.89
PKP4-201ENST00000389757 MAML2Q8IZL2 1156 aaPredicted RBP9.46□□□□□ -0.89
PKP4-201ENST00000389757 STEAP2Q8NFT2 490 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 GPBAR1Q8TDU6 330 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 TOMM40LQ969M1 308 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 GIMAP5Q96F15 307 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 PHOX2BQ99453 314 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 ZNF224Q9NZL3 707 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.89
PKP4-201ENST00000389757 EBF1Q9UH73 591 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 DUSP13Q9UII6 198 aa9.46□□□□□ -0.89
PKP4-201ENST00000389757 RBMX2Q9Y388 322 aaKnown RBP9.46□□□□□ -0.89
PKP4-201ENST00000389757 ANKRD12Q6UB98 2062 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 BORCS7-ASMTA0A0B4J1R7 106 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 HMGN4O00479 90 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 IFNA7P01567 189 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 EVI2BP34910 448 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 SCN4AP35499 1836 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 FXYD4P59646 89 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 GLYR1Q49A26 553 aaPredicted RBP9.46□□□□□ -0.9
PKP4-201ENST00000389757 OR8H3Q8N146 312 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 ITFG2Q969R8 447 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 AIFM2Q9BRQ8 373 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 LAT2Q9GZY6 243 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 PAQR5Q9NXK6 330 aaPredicted RBP9.46□□□□□ -0.9
PKP4-201ENST00000389757 ZNF281Q9Y2X9 895 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 IGHV1OR21-1A0A087WYE8 117 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 SMCO3A2RU48 225 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 SELENBP1Q13228 472 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 Q6ZPB1 254 aaPredicted RBP9.46□□□□□ -0.9
PKP4-201ENST00000389757 DPY19L4Q7Z388 723 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 B3GNT8Q7Z7M8 397 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 CHDHQ8NE62 594 aaPredicted RBP9.46□□□□□ -0.9
PKP4-201ENST00000389757 RSPRY1Q96DX4 576 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 PRR14Q9BWN1 585 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 CACNG6Q9BXT2 260 aa9.46□□□□□ -0.9
PKP4-201ENST00000389757 SURF4O15260 269 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SNAPC5O75971 98 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SERPINA2P20848 420 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 LSSP48449 732 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 DAPP51397 102 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 PNLIPRP2P54317 469 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ERVK-16P61578 105 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ZNF385BQ569K4 471 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 NXNL2Q5VZ03 156 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 LAIR1Q6GTX8 287 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 PIAS4Q8N2W9 510 aaPredicted RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 OR6Q1Q8NGQ2 317 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 GGHQ92820 318 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ST6GALNAC5Q9BVH7 336 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TNS1Q9HBL0 1735 aaKnown RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 ANKRD31Q8N7Z5 1873 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TSPAN12O95859 305 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 LGI1O95970 557 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 PTH2RP49190 550 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 GPR176Q14439 515 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SPARTQ8N0X7 666 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SIMC1Q8NDZ2 872 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ZNF431Q8TF32 576 aaPredicted RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 CHPT1Q8WUD6 406 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 CSF3RQ99062 836 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 METTL9Q9H1A3 318 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 OLAHQ9NV23 265 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ERVK13-1Q9NX77 482 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 NDUFAF4Q9P032 175 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 IGLV3-16A0A075B6K0 115 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 PPM1DO15297 605 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 ICOSLGO75144 302 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 IFNA5P01569 189 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 MLLT11Q13015 90 aaPredicted RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 SRSF5Q13243 272 aaKnown RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 SORCS2Q96PQ0 1159 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SMOC1Q9H4F8 434 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 KCNN3Q9UGI6 736 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 NUP50Q9UKX7 468 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TMEM212A6NML5 194 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TNFSF14O43557 240 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TRIM23P36406 574 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 SEC61A1P61619 476 aaKnown RBP9.45□□□□□ -0.9
PKP4-201ENST00000389757 NFATC3Q12968 1075 aa9.45□□□□□ -0.9
PKP4-201ENST00000389757 TBC1D28Q2M2D7 210 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms