RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TBC1D25Q3MII6 688 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 SLC35F2Q8IXU6 374 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 OR51L1Q8NGJ5 315 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 ZPLD1Q8TCW7 415 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 SLC25A46Q96AG3 418 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 MRPL48Q96GC5 212 aaKnown RBP22.82■■□□□ 1.24
SHOX2-201ENST00000389589 TMED9Q9BVK6 235 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 RERGLQ9H628 205 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 GALNT8Q9NY28 637 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 HS3ST3B1Q9Y662 390 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 FRYLO94915 3013 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 C2orf72A6NCS6 295 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 RNF13O43567 381 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 SERPINI2O75830 405 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 DKK1O94907 266 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 CD59P13987 128 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 E2F1Q01094 437 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 KRR1Q13601 381 aaKnown RBP22.81■■□□□ 1.24
SHOX2-201ENST00000389589 VASH1Q7L8A9 365 aaPredicted RBP22.81■■□□□ 1.24
SHOX2-201ENST00000389589 BTLAQ7Z6A9 289 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 SLC25A36Q96CQ1 311 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 C4orf36Q96KX1 117 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 TSPAN32Q96QS1 320 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 TAS2R5Q9NYW4 299 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 MED11Q9P086 117 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 R4GN57 208 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 WISP1O95388 367 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 TFP02787 698 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 TRAM1Q15629 374 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 VASNQ6EMK4 673 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 NAXDQ8IW45 347 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 SYS1Q8N2H4 156 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 OR10G3Q8NGC4 313 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 BARHL1Q9BZE3 327 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 RPRD1BQ9NQG5 326 aaKnown RBP22.81■■□□□ 1.24
SHOX2-201ENST00000389589 POLHQ9Y253 713 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 WIF1Q9Y5W5 379 aa22.81■■□□□ 1.24
SHOX2-201ENST00000389589 J3QLW9 94 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 ETV2O00321 342 aaPredicted RBP22.8■■□□□ 1.24
SHOX2-201ENST00000389589 LRRTM2O43300 516 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 STK17BO94768 372 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 ZNF19P17023 458 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 MAP2K6P52564 334 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 GHDCQ8N2G8 530 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 EXD3Q8N9H8 876 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 OR6K6Q8NGW6 343 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 KCNS3Q9BQ31 491 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 INIPQ9NRY2 104 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 ZMIZ1Q9ULJ6 1067 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 GABRPO00591 440 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 CDX4O14627 284 aaPredicted RBP22.8■■□□□ 1.24
SHOX2-201ENST00000389589 TP53I11O14683 189 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 DXOO77932 396 aaKnown RBP22.8■■□□□ 1.24
SHOX2-201ENST00000389589 RENP00797 406 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 PTGDSP41222 190 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 HSF2Q03933 536 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 ALG12Q9BV10 488 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 SMURF1Q9HCE7 757 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 ZNF346Q9UL40 294 aaKnown RBP22.8■■□□□ 1.24
SHOX2-201ENST00000389589 PADI1Q9ULC6 663 aa22.8■■□□□ 1.24
SHOX2-201ENST00000389589 IQCMA0A1B0GVH7 501 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 A0A1W2PQ72 361 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 PLPP2O43688 288 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 ETV6P41212 452 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 NAA10P41227 235 aaPredicted RBP22.79■■□□□ 1.24
SHOX2-201ENST00000389589 MFSD13AQ14CX5 517 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 RGS21Q2M5E4 152 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 MESTQ5EB52 335 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 LINC01590Q5TEZ4 76 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 BICRALQ6AI39 1079 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 RAB11FIP2Q7L804 512 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 ZNRF4Q8WWF5 429 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 TAAR9Q96RI9 348 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 HDHD5Q9BXW7 423 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 KCNN2Q9H2S1 579 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 DMDP11532 3685 aa22.79■■□□□ 1.24
SHOX2-201ENST00000389589 ZNF208O43345 1280 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 RGS9O75916 674 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 OR6A2O95222 327 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 CALRP27797 417 aaKnown RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 GRPRP30550 384 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SDC2P34741 201 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 ZNF41P51814 821 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 OR12D2P58182 307 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 MXD1Q05195 221 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 NDUFAF7Q7L592 441 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 MARCH9Q86YJ5 346 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 OR2T4Q8NH00 348 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SMAP2Q8WU79 429 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 TPK1Q9H3S4 243 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 CPNE5Q9HCH3 593 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 MRPL39Q9NYK5 338 aaKnown RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SIRT4Q9Y6E7 314 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 B4DXG7 233 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 ITGA10O75578 1167 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 CDONQ4KMG0 1287 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SLC25A53Q5H9E4 307 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 OPN5Q6U736 354 aa22.78■■□□□ 1.24
SHOX2-201ENST00000389589 C6orf15Q6UXA7 325 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-201ENST00000389589 SSX6Q7RTT6 188 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms