RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 APOC1P02654 83 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR89BP0CG08 455 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 LINC00303Q3SY05 128 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 MS4A6EQ96DS6 147 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC38A1Q9H2H9 487 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF768Q9H5H4 540 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC23A2Q9UGH3 650 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 PLEKHM1Q9Y4G2 1056 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR75O95800 540 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADH1BP00325 375 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 F3P13726 295 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 TAS2R20P59543 309 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 TNFRSF17Q02223 184 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 RPE65Q16518 533 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRR22Q8IZ63 422 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 C2CD4CQ8TF44 421 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SMIM4Q8WVI0 70 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 Q96M85 177 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF587Q96SQ5 575 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SDF2Q99470 211 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 TSPAN10Q9H1Z9 355 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 E9PI62 339 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 GCM2O75603 506 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 MPIG6BO95866 241 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADRB1P08588 477 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 RPS27P42677 84 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 POU3F4P49335 361 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPAT4Q86UL3 456 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR7G2Q8NG99 324 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR11H7Q8NGC8 314 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR5M1Q8NGP8 315 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
TRAPPC9-201ENST00000389328 A0A0A6YYC8 382 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 I3L1I5 382 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC16A7O60669 478 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 TRHRP34981 398 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 BDH1Q02338 343 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 ERV3-1Q14264 604 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR18Q14330 331 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 LIPNQ5VXI9 398 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 AWAT2Q6E213 333 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC29A4Q7RTT9 530 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 ALG14Q96F25 216 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 APMAPQ9HDC9 416 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 IL20Q9NYY1 176 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 CKAP5Q14008 2032 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 MEIKINA0A087WXM9 373 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 IFITM5A6NNB3 132 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 TSPAN15O95858 294 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 CSTBP04080 98 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 P2RY2P41231 377 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 MMP15P51511 669 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 GSG1Q2KHT4 349 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 TTLL10Q6ZVT0 673 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 C17orf47Q8NEP4 570 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 RNF170Q96K19 258 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 MYADMQ96S97 322 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 NRTNQ99748 197 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 A0A1B0GUH1 482 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 MEGF11A6BM72 1044 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 SSX5O60225 188 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR2L8Q8NGY9 312 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRRT1Q99946 306 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 CLDND1Q9NY35 253 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAFFQ9ULX9 164 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
TRAPPC9-201ENST00000389328 GNRH1P01148 92 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CEBPBP17676 345 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ACHEP22303 614 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CDK5R1Q15078 307 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 SLC9A3R2Q15599 337 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 SMIM19Q96E16 107 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 KCND3Q9UK17 655 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 A0A0A6YYH2 397 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 A6NJ64 397 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF726A6NNF4 738 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 PHYHO14832 338 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 SULT1B1O43704 296 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 TNFP01375 233 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 VAMP2P63027 116 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CYCSP99999 105 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 RHOUQ7L0Q8 258 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms