RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ABHD12BQ7Z5M8 362 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 MFSD8Q8NHS3 518 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ZNF417Q8TAU3 575 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 FAM168AQ92567 244 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 TAAR8Q969N4 342 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 SPDL1Q96EA4 605 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 SLC38A2Q96QD8 506 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ZNF587Q96SQ5 575 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 WFDC6Q9BQY6 131 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ARMC7Q9H6L4 198 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 BCL2L10Q9HD36 194 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 THUMPD1Q9NXG2 353 aaKnown RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 IGKV1D-42A0A075B6H8 117 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 A8MV72 311 aaPredicted RBP12.32□□□□□ -0.44
SHOX-202ENST00000381575 VAMP5O95183 116 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 CECR9P0C854 216 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
SHOX-202ENST00000381575 AQP1P29972 269 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 CALCRP30988 508 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 UBE2NP61088 152 aaKnown RBP12.32□□□□□ -0.44
SHOX-202ENST00000381575 CHRNB3Q05901 458 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 CARTPTQ16568 116 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 MST1LQ2TV78 715 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
SHOX-202ENST00000381575 TNFRSF13CQ96RJ3 184 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 KCNS3Q9BQ31 491 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 RAD21L1Q9H4I0 556 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
SHOX-202ENST00000381575 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 ZNF43P17038 809 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 GRPRP30550 384 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 EFNA4P52798 201 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 AQP5P55064 265 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 DSCR9P59020 149 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 ARF1P84077 181 aaKnown RBP12.31□□□□□ -0.44
SHOX-202ENST00000381575 CDK6Q00534 326 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 ZSWIM7Q19AV6 140 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 SWI5Q1ZZU3 235 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 AGKQ53H12 422 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 LRIF1Q5T3J3 769 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 CARD17Q5XLA6 110 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 HIPK1Q86Z02 1210 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 LRRC8CQ8TDW0 803 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 C7orf26Q96N11 449 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
SHOX-202ENST00000381575 PIF1Q9H611 641 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
SHOX-202ENST00000381575 PMF1-BGLAPU3KQ54 211 aa12.31□□□□□ -0.44
SHOX-202ENST00000381575 LRRN3E7EW58 273 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 AIM2O14862 343 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ZNF432O94892 652 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 HPRP00739 348 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 HLA-DOBP13765 273 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ETS2P15036 469 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 SLC25A16P16260 332 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 PRKAR1BP31321 381 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 NAAAQ02083 359 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 NPRL3Q12980 569 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 SCARB2Q14108 478 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 GGTLC2Q14390 218 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 CEACAM16Q2WEN9 425 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 TTMPQ5BVD1 217 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ALG10BQ5I7T1 473 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 AGBL2Q5U5Z8 902 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ANKRD16Q6P6B7 361 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 C6orf89Q6UWU4 347 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 SLC46A3Q7Z3Q1 461 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 WDFY1Q8IWB7 410 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 CA10Q9NS85 328 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 KLHL14Q9P2G3 628 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 TRBV5-3A0A0A0MS03 114 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 TRAF3IP2O43734 574 aaPredicted RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 SLC43A1O75387 559 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 CRYAAP02489 173 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 OR4A8P0C604 315 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 IGHV4-31P0DP07 118 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 RGS8P57771 180 aaPredicted RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 NCALDP61601 193 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
SHOX-202ENST00000381575 VLDLRP98155 873 aa12.3□□□□□ -0.44
SHOX-202ENST00000381575 ADIPOQQ15848 244 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms