RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TMEM230Q96A57 120 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 TSSK2Q96PF2 358 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 CCM2LQ9NUG4 571 aaPredicted RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 C20orf202A1L168 122 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SPINT2O43291 252 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 GPR137BO60478 399 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 KIR2DL3P43628 341 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RPL26P61254 145 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 LTB4RQ15722 352 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 ANKRD34AQ69YU3 496 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 UNC5DQ6UXZ4 953 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 ZNF546Q86UE3 836 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 TMEM200AQ86VY9 491 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 DEFB123Q8N688 67 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 EDAQ92838 391 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 NPY6RQ99463 290 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RIMS4Q9H426 269 aaPredicted RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 GLTPQ9NZD2 209 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 CHRNA9Q9UGM1 479 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 PIGLQ9Y2B2 252 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 AADACP22760 399 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SH3BP2P78314 561 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OTPQ5XKR4 325 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 PIGWQ7Z7B1 504 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 TSPYL5Q86VY4 417 aaPredicted RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR5B3Q8NH48 314 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 SLC2A13Q96QE2 648 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SSU72Q9NP77 194 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 ZNF230Q9UIE0 474 aaPredicted RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 CDC42BPAQ5VT25 1732 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 MEIOCA2RUB1 952 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SIRPB1O00241 398 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 HMGCLP35914 325 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PMP22Q01453 160 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SLC10A2Q12908 348 aaPredicted RBP11.55□□□□□ -0.56
CHD3-203ENST00000380358 SLC6A19Q695T7 634 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 LETMD1Q6P1Q0 360 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 TERB2Q8NHR7 220 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PIGBOS1A0A0B4J2F0 54 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 FGF3P11487 239 aaPredicted RBP11.55□□□□□ -0.56
CHD3-203ENST00000380358 CYBAP13498 195 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 OR10K1Q8NGX5 313 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ESRP2Q9H6T0 727 aaKnown RBP11.55□□□□□ -0.56
CHD3-203ENST00000380358 DMRT3Q9NQL9 472 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 C1orf105O95561 183 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 WNT11O96014 354 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 OSMP13725 252 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
CHD3-203ENST00000380358 TBPL2Q6SJ96 375 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SERPINA11Q86U17 422 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 MYADMQ96S97 322 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 LHPPQ9H008 270 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SAP130Q9H0E3 1048 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ZNF835Q9Y2P0 537 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PNCKQ6P2M8 343 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 BANF2Q9H503 90 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 KCNIP2Q9NS61 270 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 SLC5A10A0PJK1 596 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 OR2M5A3KFT3 312 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 F5H697 171 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 GFRA2O00451 464 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 MYF5P13349 255 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PCSK2P16519 638 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 CRMP1Q14194 572 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 DUSP7Q16829 419 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 H2BFWTQ7Z2G1 175 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 DNAJC22Q8N4W6 341 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PACRGLQ8N7B6 248 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 NTPCRQ9BSD7 190 aaKnown RBP11.55□□□□□ -0.56
CHD3-203ENST00000380358 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 ZNF337Q9Y3M9 751 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 FAM90A27PA6NNH2 459 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 M0QYG6 137 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PIAS2O75928 621 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 CDK4P11802 303 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 MARCH3Q86UD3 253 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 CATSPERDQ86XM0 798 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 TANKQ92844 425 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 MUL1Q969V5 352 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 LIN7BQ9HAP6 207 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 STYXL1Q9Y6J8 313 aa11.55□□□□□ -0.56
CHD3-203ENST00000380358 TMEM72A0PK05 275 aa11.54□□□□□ -0.56
CHD3-203ENST00000380358 ALOX12BO75342 701 aa11.54□□□□□ -0.56
CHD3-203ENST00000380358 RD3LP0DJH9 198 aa11.54□□□□□ -0.56
CHD3-203ENST00000380358 HNRNPH3P31942 346 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms