RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DSTNP60981 165 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 ARF1P84077 181 aaKnown RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 MAPK11Q15759 364 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 NXNQ6DKJ4 435 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 SERPINA11Q86U17 422 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 ZCCHC24Q8N2G6 241 aaKnown RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 CLIP4Q8N3C7 705 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 MAGEE2Q8TD90 523 aaPredicted RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 AENQ8WTP8 325 aaKnown RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 NEU4Q8WWR8 484 aaPredicted RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 SNX18Q96RF0 628 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 LINC00470Q9BZP3 86 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 ARMC7Q9H6L4 198 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 A0A096LPI6 279 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 SDHDO14521 159 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 TCF21O43680 179 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 SLC43A1O75387 559 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 HGFACQ04756 655 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 C1DQ13901 141 aaKnown RBP20.03■□□□□ 0.8
U2AF1-202ENST00000380276 C3orf36Q3SXR2 165 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 MYPOPQ86VE0 399 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-202ENST00000380276 GPR137CQ8N3F9 429 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 NUP37Q8NFH4 326 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 STK35Q8TDR2 534 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 ZNF317Q96PQ6 595 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-202ENST00000380276 NELFAQ9H3P2 528 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 WDR55Q9H6Y2 383 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-202ENST00000380276 RPS6KB2Q9UBS0 482 aa20.03■□□□□ 0.8
U2AF1-202ENST00000380276 FBXO9Q9UK97 447 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-202ENST00000380276 DSPPQ9NZW4 1301 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 SEC14L2O76054 403 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 IGLV1-44P01699 117 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 IFNGR1P15260 489 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 EPHA3P29320 983 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 IL2RGP31785 369 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 HOXC5Q00444 222 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 ADRM1Q16186 407 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 RNF220Q5VTB9 566 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 MFSD8Q8NHS3 518 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 TMEM19Q96HH6 336 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 ANKRD27Q96NW4 1050 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 SPATA9Q9BWV2 254 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 TPK1Q9H3S4 243 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 ZNF442Q9H7R0 627 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 SLC6A13Q9NSD5 602 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 SEC14L4Q9UDX3 406 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 TMEFF2Q9UIK5 374 aaPredicted RBP20.02■□□□□ 0.8
U2AF1-202ENST00000380276 HAO1Q9UJM8 370 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 GPR45Q9Y5Y3 372 aa20.02■□□□□ 0.8
U2AF1-202ENST00000380276 TMEM229AB2RXF0 380 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 IGKV3-15P01624 115 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 KITP10721 976 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 HOXB1P14653 301 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-202ENST00000380276 CBR1P16152 277 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 BST1Q10588 318 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 SNTB2Q13425 540 aaKnown RBP20.01■□□□□ 0.79
U2AF1-202ENST00000380276 ZSWIM7Q19AV6 140 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 CEACAM16Q2WEN9 425 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 ZNF311Q5JNZ3 666 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 KRT80Q6KB66 452 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 RFLNBQ8N5W9 214 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 LINC01356Q8N9X3 169 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 GLB1L3Q8NCI6 653 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-202ENST00000380276 SLC38A5Q8WUX1 472 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 CKAP2Q8WWK9 683 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 TMEM109Q9BVC6 243 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 CRLF2Q9HC73 371 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 RCE1Q9Y256 329 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 PCDHB14Q9Y5E9 798 aa20.01■□□□□ 0.79
U2AF1-202ENST00000380276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.01■□□□□ 0.796e-8■■■□□ 16.7
U2AF1-202ENST00000380276 IGHV2OR16-5A0A0B4J2B6 119 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 CBLP22681 906 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 CCNIQ14094 377 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 GTDC1Q4AE62 458 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 RINLQ6ZS11 566 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 CDK20Q8IZL9 346 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 ANKRD42Q8N9B4 389 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 UBASH3BQ8TF42 649 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 KTI12Q96EK9 354 aaPredicted RBP20■□□□□ 0.79
U2AF1-202ENST00000380276 C1orf159Q96HA4 380 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 DOK1Q99704 481 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 TPT1P8Q9HAU6 139 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 GPR35Q9HC97 309 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 SSU72Q9NP77 194 aaKnown RBP20■□□□□ 0.79
U2AF1-202ENST00000380276 PRDM4Q9UKN5 801 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 IFT52Q9Y366 437 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 SVEP1Q4LDE5 3571 aa20■□□□□ 0.79
U2AF1-202ENST00000380276 A0A0G2JPF8 293 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 HNRNPCL2B2RXH8 293 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 HNRNPCL3B7ZW38 293 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 HNRNPCL1O60812 293 aaKnown RBP19.99■□□□□ 0.79
U2AF1-202ENST00000380276 NPIPB7O75200 414 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 IL6P05231 212 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 ADRA2AP08913 450 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 HNRNPCL4P0DMR1 293 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 GIFP27352 417 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 ARR3P36575 388 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 MVDP53602 400 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 DAG1Q14118 895 aa19.99■□□□□ 0.79
U2AF1-202ENST00000380276 TRIP10Q15642 601 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms