RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 UGT2A3Q6UWM9 527 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 PEX5LQ8IYB4 626 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 GPR137CQ8N3F9 429 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 MAGEE2Q8TD90 523 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 ZMYND19Q96E35 227 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 PKNOX2Q96KN3 472 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 LRRC37BQ96QE4 947 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 SYT3Q9BQG1 590 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 PIF1Q9H611 641 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 MTHFD2LQ9H903 347 aaPredicted RBP15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 TREM2Q9NZC2 230 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 SEC14L4Q9UDX3 406 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 RASD1Q9Y272 281 aa15.34■□□□□ 0.05
PDLIM4-202ENST00000379018 A0A0A6YYJ9 748 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 WDR91A4D1P6 747 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 SLCO1B7G3V0H7 640 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 WNT9BO14905 357 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ITM2AO43736 263 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 SLC43A1O75387 559 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 VAMP5O95183 116 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 AHSA1O95433 338 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 CREB1P16220 341 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF43P17038 809 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 CDKN2CP42773 168 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ALDH3B1P43353 468 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 RPS5P46782 204 aaKnown RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ANXA11P50995 505 aaKnown RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 GSTA3Q16772 222 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 CARD17Q5XLA6 110 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 FAHD2BQ6P2I3 314 aaPredicted RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF621Q6ZSS3 439 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF440Q8IYI8 595 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF781Q8N8C0 355 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 OR52P1PQ8NH57 321 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZFAND2BQ8WV99 257 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF837Q96EG3 531 aaPredicted RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 FAHD2AQ96GK7 314 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF317Q96PQ6 595 aaPredicted RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 PANX1Q96RD7 426 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 MRPL37Q9BZE1 423 aaKnown RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 LINC00470Q9BZP3 86 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 GPR35Q9HC97 309 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 MOV10Q9HCE1 1003 aaKnown RBP15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 REV1Q9UBZ9 1251 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 FZR1Q9UM11 496 aa15.33■□□□□ 0.04
PDLIM4-202ENST00000379018 MGAM2Q2M2H8 2515 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 CCDC154A6NI56 674 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 E9PBE3 544 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 M0R233 179 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 HPXP02790 462 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 BPGMP07738 259 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 PNMTP11086 282 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 CD79AP11912 226 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 PRG2P13727 222 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 COL8A2P25067 703 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 ARR3P36575 388 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 CLNS1AP54105 237 aaKnown RBP15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 SCGB2A2Q13296 93 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 MAD2L1BPQ15013 274 aaPredicted RBP15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 LIN52Q52LA3 116 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 DEF8Q6ZN54 512 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 PEG10Q86TG7 708 aaKnown RBP15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 TRIML2Q8N7C3 387 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 TESCQ96BS2 214 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 MS4A3Q96HJ5 214 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 PCDHB10Q9UN67 800 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 USP22Q9UPT9 525 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 NOX1Q9Y5S8 564 aa15.32■□□□□ 0.04
PDLIM4-202ENST00000379018 CDHR4A6H8M9 788 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 TMEM229AB2RXF0 380 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 TRIM77I1YAP6 450 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 M0R3G1 203 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 PPIHO43447 177 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 HLA-HP01893 362 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 MSMBP08118 114 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 TFPTP0C1Z6 253 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 HOXB1P14653 301 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 ACAA2P42765 397 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 SEC24CP53992 1094 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 PIGFQ07326 219 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 CHI3L2Q15782 390 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 SMU1Q2TAY7 513 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF311Q5JNZ3 666 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 RPS26P11Q5JNZ5 115 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 ELFN2Q5R3F8 820 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 NUDCD3Q8IVD9 361 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 FAM169BQ8N8A8 192 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 SGMS2Q8NHU3 365 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 MRPL24Q96A35 216 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 CCDC115Q96NT0 180 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 BTNL2Q9UIR0 455 aa15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF443Q9Y2A4 671 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-202ENST00000379018 LOC105371242A0A075B767 164 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 SYNGR3O43761 229 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 BCHEP06276 602 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 NUDT17P0C025 328 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 GAAP10253 952 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 EPHA1P21709 976 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms