RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR52L1Q8NGH7 329 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SLC7A13Q8TCU3 470 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ADAD1Q96M93 576 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 CDC6Q99741 560 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PCBD2Q9H0N5 130 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SRMSQ9H3Y6 488 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 HECAQ9UBI9 543 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 GPR55Q9Y2T6 319 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 FCF1Q9Y324 198 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 A0A1B0GV72 72 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 MEX3AA1L020 520 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF320A2RRD8 509 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 MANBAO00462 879 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 CCSO14618 274 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SNCAP37840 140 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 MANFP55145 182 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 C17orf64Q86WR6 236 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 APH1BQ8WW43 257 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 UBQLN4Q9NRR5 601 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 OR52A4PA6NMU1 304 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 IQCF5A8MTL0 148 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SULT2B1O00204 365 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SIM1P81133 766 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 RAB40BQ12829 278 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 OR4D1Q15615 310 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 FRG2Q64ET8 278 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 TMEM108Q6UXF1 575 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 C7orf61Q8IZ16 206 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 KRTCAP2Q8N6L1 136 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 C2orf15Q8WU43 125 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 FRG2BQ96QU4 278 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 PCDH7O60245 1069 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 BPIP17213 487 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CD96P40200 585 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 RNF144AP50876 292 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF41P51814 821 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CXADRP78310 365 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 TEAD2Q15562 447 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 SLC35D3Q5M8T2 416 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CBLL1Q75N03 491 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 LRRC70Q7Z2Q7 622 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ETFBKMTQ8IXQ9 262 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF75AQ96N20 296 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 HRASLSQ9HDD0 168 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 VPS29Q9UBQ0 182 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ZFC3H1O60293 1989 aaKnown RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 F6UZH7 168 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 GPR32O75388 356 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 EIF4EP06730 217 aaKnown RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CD200P41217 278 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 SCARB2Q14108 478 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 SLBPQ14493 270 aaKnown RBP eCLIP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ATXN7L2Q5T6C5 722 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 MED27Q6P2C8 311 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 FAHD1Q6P587 224 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ANGPTL5Q86XS5 388 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 GLB1L2Q8IW92 636 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ARL14Q8N4G2 192 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 FAM98AQ8NCA5 519 aaKnown RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 AMDHD1Q96NU7 426 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 Q9Y3F1 56 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 SLC38A8A6NNN8 435 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 ZBTB42B2RXF5 422 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 GALTP07902 379 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 GDF5P43026 501 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 FAM189BP81408 668 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 RPE65Q16518 533 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 MPPE1Q53F39 396 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 LDLRAD1Q5T700 205 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 KCTD11Q693B1 232 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 CAMKMTQ7Z624 323 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 TNFRSF14Q92956 283 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 LIN37Q96GY3 246 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-202ENST00000378161 TREX1Q9NSU2 369 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
NPHP4-202ENST00000378161 LTBP3Q9NS15 1303 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 FOXE1O00358 373 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 MOSPD3O75425 235 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CHRM4P08173 479 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GUSBP08236 651 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 H2AFB1P0C5Y9 115 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 GSTM3P21266 225 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 WDR5P61964 334 aaKnown RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SERPINA13PQ6UXR4 307 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 SLC16A9Q7RTY1 509 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 PRSS45Q7RTY3 260 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 CMBLQ96DG6 245 aa10.91□□□□□ -0.66
NPHP4-202ENST00000378161 DPH2Q9BQC3 489 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 NMNAT1Q9HAN9 279 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-202ENST00000378161 BRF2Q9HAW0 419 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms