RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GABRA6Q16445 453 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 NRF1Q16656 503 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF672Q499Z4 452 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SHEQ5VZ18 495 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 HMBOX1Q6NT76 420 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ERICH5Q6P6B1 374 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF613Q6PF04 617 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC22A25Q6T423 547 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 TMEM108Q6UXF1 575 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 H1FNTQ75WM6 255 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SSX8Q7RTT4 187 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 EPHX4Q8IUS5 362 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 UEVLDQ8IX04 471 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF611Q8N823 705 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 RASSF5Q8WWW0 418 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF317Q96PQ6 595 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 ELAC2Q9BQ52 826 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC7A7Q9UM01 511 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SH3GLB1Q9Y371 365 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC25A15Q9Y619 301 aa10.17□□□□□ -0.78
SMARCE1-203ENST00000377808 FAM220BPB1ANY3 271 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 LRRN3E7EW58 273 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 PDLIM1O00151 329 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC22A2O15244 555 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CHP2O43745 196 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 AKAP8O43823 692 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 FMO6PO60774 539 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SHOX2O60902 331 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC43A1O75387 559 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 UPK3AO75631 287 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 OR6A2O95222 327 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 NPPAP01160 153 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 IFNA14P01570 189 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 UMPSP11172 480 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 TNFRSF1BP20333 461 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 AHCYP23526 432 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 UBE2NP61088 152 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 RPS4XP62701 263 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 POU3F1Q03052 451 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 PMS2P3Q13401 168 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 HIKESHIQ53FT3 197 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CARD17Q5XLA6 110 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 TTC33Q6PID6 262 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SEZ6L2Q6UXD5 910 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 DEF8Q6ZN54 512 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SPATA21Q7Z572 469 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 YTHDF3Q7Z739 585 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CARM1Q86X55 608 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CALHM3Q86XJ0 350 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 DEPDC4Q8N2C3 294 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 GPR137CQ8N3F9 429 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 OR2T12Q8NG77 320 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 OR4D11Q8NGI4 311 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 RP9Q8TA86 221 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 ADAMTS16Q8TE57 1224 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SMAP2Q8WU79 429 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 GTPBP3Q969Y2 492 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 TPD52L3Q96J77 140 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 OXGR1Q96P68 337 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 ALG2Q9H553 416 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC17A5Q9NRA2 495 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CISD1Q9NZ45 108 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 BAG5Q9UL15 447 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 B3GALT5Q9Y2C3 310 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 AMDHD2Q9Y303 409 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 CORINQ9Y5Q5 1042 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 PRR14LQ5THK1 2151 aa10.16□□□□□ -0.78
SMARCE1-203ENST00000377808 DSCAMO60469 2012 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 A0A096LPE4 126 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 A0A1W2PPZ6 126 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 TRAPPC13A5PLN9 417 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 OR6C65A6NJZ3 312 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 C11orf98E9PRG8 122 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 WNT11O96014 354 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 BGLAPP02818 100 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 COX4I1P13073 169 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 PTAFRP25105 342 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 PTH2RP49190 550 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 SEC24CP53992 1094 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 ATP5J2P56134 94 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 TAS2R41P59536 307 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 PRPS1P60891 318 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC25A3Q00325 362 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 ROR2Q01974 943 aaKnown RBP10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 CCDC80Q76M96 950 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 LRRC75A-AS1Q8N1F1 130 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 C17orf78Q8N4C9 275 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 LILRB1Q8NHL6 650 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 SLC41A3Q96GZ6 507 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 RADILQ96JH8 1075 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 Q96MF0 132 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 ZNF583Q96ND8 569 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 MUS81Q96NY9 551 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 MOGAT1Q96PD6 335 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 TMEM43Q9BTV4 400 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms