RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PPOXP50336 477 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 MVDP53602 400 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 NCALDP61601 193 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 SLC25A3Q00325 362 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 EFNB3Q15768 340 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 SWI5Q1ZZU3 235 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 HIKESHIQ53FT3 197 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 FAM166AQ6J272 317 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 UGT2A3Q6UWM9 527 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 NUP37Q8NFH4 326 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 OXGR1Q96P68 337 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 EPYCQ99645 322 aa12.87□□□□□ -0.35
HDAC6-204ENST00000376643 CRNNQ9UBG3 495 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-204ENST00000376643 IGHV1-18A0A0C4DH31 117 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 PRORSD1PA6NEY8 169 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 CLIC1O00299 241 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 GPRIN2O60269 458 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 LMX1BO60663 402 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 LGI1O95970 557 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 BMP2P12643 396 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 ARR3P36575 388 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 SELENOPP49908 381 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 P2RY4P51582 365 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
HDAC6-204ENST00000376643 ROR2Q01974 943 aaKnown RBP12.86□□□□□ -0.35
HDAC6-204ENST00000376643 NAAAQ02083 359 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 BNIP2Q12982 314 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 RGNQ15493 299 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 MAPK11Q15759 364 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 FAM69AQ5T7M9 428 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 ADPRHL1Q8NDY3 354 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 BCL2L2Q92843 193 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-204ENST00000376643 SLC25A36Q96CQ1 311 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 ZNF442Q9H7R0 627 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 SLC13A4Q9UKG4 626 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 PCDHB14Q9Y5E9 798 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
HDAC6-204ENST00000376643 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 FZD7O75084 574 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 ENTPD5O75356 428 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 TGDSO95455 350 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 IGKV3-15P01624 115 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 IGLV1-44P01699 117 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 APEHP13798 732 aaKnown RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 CBR1P16152 277 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 NR4A2P43354 598 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 MRPL19P49406 292 aaKnown RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 CLDN17P56750 224 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 FAM91A1Q658Y4 838 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 CLIP4Q8N3C7 705 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 NEU4Q8WWR8 484 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 TESQ9UGI8 421 aaKnown RBP12.85□□□□□ -0.35
HDAC6-204ENST00000376643 USP22Q9UPT9 525 aa12.85□□□□□ -0.35
HDAC6-204ENST00000376643 TRAV36DV7A0A075B6V5 113 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 FTCDNL1E5RQL4 147 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SERPINB7O75635 380 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 C1QCP02747 245 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 OR4A8P0C604 315 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 CECR9P0C854 216 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SRD5A1P18405 259 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 GGTLC2Q14390 218 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SLC9B1Q4ZJI4 515 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 ALG10BQ5I7T1 473 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 REEP3Q6NUK4 255 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 ULK3Q6PHR2 472 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 H1FNTQ75WM6 255 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 HTRA1Q92743 480 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 GTF2H4Q92759 462 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SLC47A1Q96FL8 570 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 ZNF607Q96SK3 696 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 HEATR1Q9H583 2144 aaKnown RBP12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SLC6A13Q9NSD5 602 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 FBXL3Q9UKT7 428 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 SPEF1Q9Y4P9 236 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
HDAC6-204ENST00000376643 EVPLLA8MZ36 301 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms