RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 RINLQ6ZS11 566 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 C10orf111Q8N326 155 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 OR52P1PQ8NH57 321 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 WDR60Q8WVS4 1066 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 MAL2Q969L2 176 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 RADILQ96JH8 1075 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 ANKRD27Q96NW4 1050 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CPPED1Q9BRF8 314 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-205ENST00000376492 SPATA9Q9BWV2 254 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CADM1Q9BY67 442 aaKnown RBP11.52□□□□□ -0.57
CLCN6-205ENST00000376492 IKZF5Q9H5V7 419 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 TMEM38AQ9H6F2 299 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CDHR4A6H8M9 788 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 M0R1B8 84 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 FXYD1O00168 92 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 WIPF1O43516 503 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 ARAFP10398 606 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 HSD17B1P14061 328 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 ETS2P15036 469 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 HOXB6P17509 224 aaKnown RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 SLC6A2P23975 617 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 RYKP34925 604 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 PSME3P61289 254 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 SELENBP1Q13228 472 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 NFYCQ13952 458 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 GGTLC2Q14390 218 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 ADRM1Q16186 407 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 FXNQ16595 210 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 RNF220Q5VTB9 566 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 P2RY8Q86VZ1 359 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 VRK2Q86Y07 508 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF440Q8IYI8 595 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 DEFB107AQ8IZN7 70 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 BBS10Q8TAM1 723 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 PROX1Q92786 737 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 MSI2Q96DH6 328 aaKnown RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 OR5B2Q96R09 309 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 CGREF1Q99674 301 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 C1QTNF6Q9BXI9 259 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 SERINC1Q9NRX5 453 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 RLIMQ9NVW2 624 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-205ENST00000376492 MGAT4BQ9UQ53 548 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 SLC25A15Q9Y619 301 aa11.51□□□□□ -0.57
CLCN6-205ENST00000376492 LOC100289279A0A1B0GTE1 492 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF724A8MTY0 619 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 C5orf58C9J3I9 102 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CSF3P09919 207 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 PTAFRP25105 342 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 IDH2P48735 452 aaKnown RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 GZMKP49863 264 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 EFNA4P52798 201 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 FOXG1P55316 489 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CDK6Q00534 326 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 MERTKQ12866 999 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 EPS8Q12929 822 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 TRAP1Q12931 704 aaKnown RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 REEP3Q6NUK4 255 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF836Q6ZNA1 936 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 GRINAQ7Z429 371 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 GALNT5Q7Z7M9 940 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 LSRQ86X29 649 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 UBE2J2Q8N2K1 259 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CLIP4Q8N3C7 705 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 OR52E4Q8NGH9 312 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF563Q8TA94 476 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 C3orf49Q96BT1 292 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 C1orf159Q96HA4 380 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF443Q9Y2A4 671 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CHST2Q9Y4C5 530 aa11.5□□□□□ -0.57
CLCN6-205ENST00000376492 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 VWC2LB2RUY7 222 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 AP3D1O14617 1153 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 SLC1A3P43003 542 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 HTR3AP46098 478 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 MAP2K6P52564 334 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 BNIP2Q12982 314 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF311Q5JNZ3 666 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 NANOGP8Q6NSW7 305 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms