RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 DNAJA4Q8WW22 397 aaPredicted RBP12.42□□□□□ -0.42
NELFE-201ENST00000375425 DYDC1Q8WWB3 177 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 BCL2L2Q92843 193 aaPredicted RBP12.42□□□□□ -0.42
NELFE-201ENST00000375425 OXGR1Q96P68 337 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 MDFIQ99750 246 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 SPATA5L1Q9BVQ7 753 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 IKZF5Q9H5V7 419 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 B3GAT1Q9P2W7 334 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 ABCA1O95477 2261 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 HEATR1Q9H583 2144 aaKnown RBP12.41□□□□□ -0.42
NELFE-201ENST00000375425 A0A096LPE4 126 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 TRBV5-3A0A0A0MS03 114 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 EVPLLA8MZ36 301 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 H7C417 338 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 CD5LO43866 347 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 GPRIN2O60269 458 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 ZNF432O94892 652 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 GPX2P18283 190 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 SLC6A2P23975 617 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 DSCR9P59020 149 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 UBE2NP61088 152 aaKnown RBP12.41□□□□□ -0.42
NELFE-201ENST00000375425 ROR2Q01974 943 aaKnown RBP12.41□□□□□ -0.42
NELFE-201ENST00000375425 ADRM1Q16186 407 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 MST1LQ2TV78 715 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 ALG10BQ5I7T1 473 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 FAM69AQ5T7M9 428 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 ANKRD16Q6P6B7 361 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 NET1Q7Z628 596 aaPredicted RBP12.41□□□□□ -0.42
NELFE-201ENST00000375425 ZNF525Q8N782 197 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 SLC38A2Q96QD8 506 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 LINC00470Q9BZP3 86 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 PMF1-BGLAPU3KQ54 211 aa12.41□□□□□ -0.42
NELFE-201ENST00000375425 IGKV1D-42A0A075B6H8 117 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TRAV36DV7A0A075B6V5 113 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 M0R082 166 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 AIM2O14862 343 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TLX2O43763 284 aaPredicted RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 CBLP22681 906 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 PAX7P23759 505 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 AQP1P29972 269 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 ATP4BP51164 291 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 EFNA4P52798 201 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TUBA1BP68363 451 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TUBA4AP68366 448 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 SCARB2Q14108 478 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 SQLEQ14534 574 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 SWI5Q1ZZU3 235 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 ULK3Q6PHR2 472 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 C5orf46Q6UWT4 87 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TUBA1AQ71U36 451 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 H1FNTQ75WM6 255 aaPredicted RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 RNF217Q8TC41 542 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 MAGEE2Q8TD90 523 aaPredicted RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 SLC38A4Q969I6 547 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 FBXO17Q96EF6 278 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 ZNF607Q96SK3 696 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 KCNS3Q9BQ31 491 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 TMEM27Q9HBJ8 222 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 YAE1D1Q9NRH1 226 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.4□□□□□ -0.42
NELFE-201ENST00000375425 CORO2BQ9UQ03 480 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 RCE1Q9Y256 329 aa12.4□□□□□ -0.42
NELFE-201ENST00000375425 A0A096LNT2 108 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 RPL36A-HNRNPH2H7BZ11 118 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 TPST2O60704 377 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 FZD7O75084 574 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 SLC43A1O75387 559 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 SERPINB7O75635 380 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 LY6HO94772 140 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 F12P00748 615 aaPredicted RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 CRYAAP02489 173 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 GRPRP30550 384 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 ARF1P84077 181 aaKnown RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 OR1Q1Q15612 314 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 RUNDC3AQ59EK9 446 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 FAM91A1Q658Y4 838 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 FAM168AQ92567 244 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 SLC47A1Q96FL8 570 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 TNFRSF13CQ96RJ3 184 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 NELFAQ9H3P2 528 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 GPR35Q9HC97 309 aa12.39□□□□□ -0.43
NELFE-201ENST00000375425 INTS9Q9NV88 658 aaKnown RBP12.39□□□□□ -0.43
NELFE-201ENST00000375425 SELENONQ9NZV5 590 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms