RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SLC2A12Q8TD20 617 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 TCTEX1D2Q8WW35 142 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 RBPMSQ93062 196 aaKnown RBP10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SORCS2Q96PQ0 1159 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SGPP1Q9BX95 441 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 PLEK2Q9NYT0 353 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 TMPRSS11EQ9UL52 423 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 CA5BQ9Y2D0 317 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SULT1B1O43704 296 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 DPM1O60762 260 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 NID1P14543 1247 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 IL32P24001 234 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 HTR2CP28335 458 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 PKLRP30613 574 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 TGM4P49221 684 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 DUSP5Q16690 384 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 PRSS36Q5K4E3 855 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 DPY19L2P2Q6ZN68 376 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 MSRB3Q8IXL7 192 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 EID2Q8N6I1 236 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 OR14K1Q8NGZ2 314 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SULT4A1Q9BR01 284 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 SRRQ9GZT4 340 aa10.68□□□□□ -0.7
PTCH1-203ENST00000375274 ARRDC5A6NEK1 342 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 RFXAPO00287 272 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 PAPLNO95428 1278 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SYNGR4O95473 234 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TGM1P22735 817 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 PRPH2P23942 346 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TACR3P29371 465 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 EMP3P54852 163 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 CLDN6P56747 220 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ERVFC1P60507 584 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 FABP5Q01469 135 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TNK1Q13470 666 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ALKBH1Q13686 389 aaKnown RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 OR5M10Q6IEU7 315 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SULF2Q8IWU5 870 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SPTSSAQ969W0 71 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 OR5B12Q96R08 314 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ISYNA1Q9NPH2 558 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 VSX1Q9NZR4 365 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 NOX1Q9Y5S8 564 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ETV7Q9Y603 341 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TNRC6CQ9HCJ0 1690 aaKnown RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ABCA3Q99758 1704 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 A0A1W2PR48 441 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 FAM78AQ5JUQ0 283 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SHISA6Q6ZSJ9 500 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF679Q8IYX0 411 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TMEM99Q8N816 258 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 MS4A6EQ96DS6 147 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 Q96M85 177 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SFXN2Q96NB2 322 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 MICU1Q9BPX6 476 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 LDAHQ9H6V9 325 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 QPCTLQ9NXS2 382 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 FBXO24O75426 580 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 DRD1P21728 446 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF836Q6ZNA1 936 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SLC16A9Q7RTY1 509 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 OR13C9Q8NGT0 318 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 STK35Q8TDR2 534 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 C19orf43Q9BQ61 176 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SMIM3Q9BZL3 60 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 WDR76Q9H967 626 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 DUSP22Q9NRW4 184 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SIRT5Q9NXA8 310 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 REV1Q9UBZ9 1251 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SCN1AP35498 2009 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 GGT3PA6NGU5 568 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 H3BUI4 141 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 PRICKLE3O43900 615 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SLC9A3R2Q15599 337 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 GLYATL2Q8WU03 294 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 WASH6PQ9NQA3 447 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SAGE1Q9NXZ1 904 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 NCDNQ9UBB6 729 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SMCHD1A6NHR9 2005 aa10.67□□□□□ -0.7
PTCH1-203ENST00000375274 SULT2B1O00204 365 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 FCMRO60667 390 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF254O75437 659 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MALLQ13021 153 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 C14orf28Q4W4Y0 310 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 FAM122CQ6P4D5 195 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SDF2Q99470 211 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 CRB3Q9BUF7 120 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 CMC2Q9NRP2 79 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 EFCAB7A8K855 629 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms