RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 Q6ZNB5 142 aa11.41□□□□□ -0.58
NPLOC4-202ENST00000374747 OR5K2Q8NHB8 316 aa11.41□□□□□ -0.58
NPLOC4-202ENST00000374747 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-202ENST00000374747 TOR1AO14656 332 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 KCNK2O95069 426 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PDGFAP04085 211 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 CD38P28907 300 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 OR7A5Q15622 319 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 AVPI1Q5T686 147 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 HENMT1Q5T8I9 393 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PAPD4Q6PIY7 484 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 IDO2Q6ZQW0 420 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 RFLNAQ6ZTI6 216 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 OR8J2Q8NGG1 315 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 WBP2Q969T9 261 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 CA5BQ9Y2D0 317 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ZNF638Q14966 1978 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 A0A0B4J2A0 478 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ZNF26P17031 533 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 HTR3AP46098 478 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 TGM4P49221 684 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 MTNR1BP49286 362 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ACY1Q03154 408 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 TAAR8Q969N4 342 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 HRASLS5Q96KN8 279 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 BTBD2Q9BX70 525 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ELOVL3Q9HB03 270 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ACSS1Q9NUB1 689 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 SHPKQ9UHJ6 478 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 MPPED1O15442 326 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 COX15Q7KZN9 410 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 LKAAEAR1Q8TD35 194 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 LYSMD1Q96S90 227 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 HCAR1Q9BXC0 346 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ANK1P16157 1881 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 KNL1Q8NG31 2342 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 CPNE6O95741 557 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 HBQ1P09105 142 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 SERPINA2P20848 420 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 OPRD1P41143 372 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 WBP2NLQ6ICG8 309 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PTCRAQ6ISU1 281 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PARM1Q6UWI2 310 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 ZNF761Q86XN6 746 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 OR52R1Q8NGF1 315 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 SGK3Q96BR1 496 aa11.4□□□□□ -0.58
NPLOC4-202ENST00000374747 PARP14Q460N5 1801 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 ANKRD30BLA7E2S9 258 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 SCGB1D1O95968 90 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 POLR2IP36954 125 aaKnown RBP11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 CSNK1A1P48729 337 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 NHSL2Q5HYW2 709 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 OR7E24Q6IFN5 339 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 SFXN4Q6P4A7 337 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 PRR22Q8IZ63 422 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 PXT1Q8NFP0 134 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 MED30Q96HR3 178 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 NTN4Q9HB63 628 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 NRIP3Q9NQ35 241 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 SEMA4GQ9NTN9 838 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 HAO2Q9NYQ3 351 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 VDAC3Q9Y277 283 aa11.4□□□□□ -0.59
NPLOC4-202ENST00000374747 MSTNO14793 375 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 ICMTO60725 284 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 TPPPO94811 219 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 TCRBP04435 133 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 APLNRP35414 380 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 PXNP49023 591 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 RPS18P62269 152 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 FCN2Q15485 313 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 RPE65Q16518 533 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 LYSMD4Q5XG99 296 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 RNF113BQ8IZP6 322 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 LGALS14Q8TCE9 139 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 RNF141Q8WVD5 230 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 ZNF583Q96ND8 569 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 PLEKHM1Q9Y4G2 1056 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 TRIP12Q14669 1992 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 SULT2B1O00204 365 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 HIST1H1TP22492 207 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 APEX1P27695 318 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 MAGEB1P43366 347 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 GPLD1P80108 840 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 PRDX1Q06830 199 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 MLF2Q15773 248 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 INSM2Q96T92 566 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-202ENST00000374747 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms